Hal Archives
05/07/2025
Article
Temporal dynamics and biogeography of sympagic and planktonic photosynthetic microbial eukaryotes during the under-ice Arctic bloom
ISME Communications , 2025
Clarence Wei Hung Sim
Catherine Gérikas Ribeiro
Florence Le Gall
Ian Probert
Priscilla Gourvil
Connie Lovejoy
Daniel Vaulot
Adriana Lopes dos Santos
05/01/2025
Article
Mg/Ca from mussel shells rather than δ18O as a promising temperature proxy for hydrothermal vent ecosystems
Deep Sea Research Part I: Oceanographic Research Papers , 2025 , 219 , pp. 104485
V. Mouchi
K. Nedoncelle
O. Bruguier
Z. Garmirian
N. Le Bris
F. Lartaud
04/29/2025
Article
Meiofauna investigation and taxonomic identification through imaging—a game of compromise
Limnology and Oceanography: Methods , 2025
Valentin Foulon
Abdesslam Benzinou
Kamal Nasreddine
Abdul Qayyum
Edwin Daché
Valentine Foulquier
Catherine Borremans
Marine Malloci
Colomban de Vargas
Daniela Zeppilli
04/04/2025
Article
Adaptive genomic plasticity in large-genome, broad-host-range vibrio phages
The International Society of Microbiologial Ecology Journal , 2025 , pp. wraf063
Charles Bernard
Yannick Labreuche
Carine Diarra
Pauline Daszkowski
Karine Cahier
David Goudenège
Martin G Lamarche
Gregory B Whitfield
Manon Lang
Jeffrey Valencia
et al.
03/31/2025
Article
Fine Scale Patterns of Population Structure and Connectivity in Scandinavian Flat Oysters in Scandinavia ( Ostrea edulis L.)
Evolutionary Applications , 2025 , 18 (4)
Chloé Robert
Homère Alves Monteiro
Alan Le Moan
Arnaud Tanguy
Ane Laugen
Jakob Hemmer-Hansen
Åsa Strand
Pierre de Wit
03/12/2025
Article
First release of the European marine omics biodiversity observation network (EMO BON) shotgun metagenomics data from water and sediment samples
Biodiversity Data Journal , 2025 , 13
Christina Pavloudi
Ioulia Santi
Iñigo Azua
Zuriñe Baña
Mauro Bastianini
Caroline Belser
Jone Bilbao
Julie Bitz-Thorsen
Caroline Broudin
Mathieu Camusat
et al.
03/08/2025
Article
Multiple, diverse endogenous giant virus elements within the genome of a brown alga
Virus Evolution , 2025 , 11 (1)
Dean Mckeown
Alexandre Cormier
Declan Schroeder
Arnaud Couloux
Nachida Tadrent
J. Mark Cock
Erwan Corre
03/01/2025
Article
Alpha and beta diversities of hydrothermal vent macrofaunal communities along the southwestern Pacific back-arc basins
Science of the Total Environment , 2025 , 967 , pp. 178694
Camille Poitrimol
Éric Thiébaut
Cédric Boulart
Cécile Cathalot
Olivier Rouxel
Didier Jollivet
Stephane Hourdez
Marjolaine Matabos
02/24/2025
Article
How institutions can better support international early-career researchers
Nature Human Behaviour , 2025
Marek Lubośny
Pavanee Annasawmy
Itziar Burgués Martínez
Timotej Turk Dermastia
Lucía Espasandín
Joana Filipa Fernandes
Marcos Fontela
Cristina Galobart
Odei Garcia-Garin
Inês Gregório
et al.
02/21/2025
Article
Unraveling the Impact of Marine Heatwaves on the Eukaryome of the Emblematic Mediterranean Red Coral Corallium rubrum
ISME Communications , 2025
Camille Prioux
Christine Ferrier-Pagès
Javier del Campo
Laure Guillou
Tristan Estaque
Denis Allemand
Romie Tignat-Perrier
02/04/2025
Comm. dans un congrès
PHYTOSTABILISATION D'UN SITE MINIER Etude de faisabilité : application au site du Bois Vert
Souhir Soussou
Geoffroy Alexandre
Jean-Claude Cleyet-Marel
Valérie Guérin
Louis de Lary
02/01/2025
Article
Symbionts of predatory protists are widespread in the oceans and related to animal pathogens
Cell Host & Microbe , 2025 , 33 (2) , pp. 182-199.e7
Fabian Wittmers
Camille Poirier
Charles Bachy
Charlotte Eckmann
Olga Matantseva
Craig Carlson
Stephen Giovannoni
Ursula Goodenough
Alexandra Worden
01/31/2025
Article
A Long‐Term Ecological Research Data Set From the Marine Genetic Monitoring Program ARMS ‐ MBON 2018–2020
Molecular Ecology Resources , 2025
Nauras Daraghmeh
Katrina Exter
Justine Pagnier
Piotr Balazy
Ibon Cancio
Giorgos Chatzigeorgiou
Eva Chatzinikolaou
Maciej Chelchowski
Nathan Alexis Mitchell Chrismas
Thierry Comtet
et al.
01/23/2025
Preprint, Working Paper
The community of Marine Alveolate parasites in the Atlantic inflow to the Arctic Ocean is structured by season, depth and water mass
Elianne Egge
Daniel Vaulot
Aud Larsen
Bente Edvardsen
01/23/2025
Preprint, Working Paper
A Novel Taxonomic Database for eukaryotic Mitochondrial Cytochrome Oxidase subunit I Gene (eKOI): Enhancing taxonomic resolution at community-level in metabarcoding analyses
Rubén González-Miguéns
Alex Gàlvez-Morante
Margarita Skamnelou
Meritxell Antó
Elena Casacuberta
Daniel Richter
Daniel Vaulot
Javier del Campo
Iñaki Ruiz-Trillo
01/15/2025
Article
Exploration of the extracellular matrix of the red alga Chondrus crispus reveals unprecedented insights into carrageenan structures
Carbohydrate Polymers , 2025 , 348 , pp. 122737
David Ropartz
Adrien Lissarrague
Murielle Jam
Diane Jouanneau
Bastien Annic
Sophie Le Gall
Mathieu Fanuel
Stacy Krueger-Hadfield
Myriam Valéro
Mirjam Czjzek
et al.
01/06/2025
Preprint, Working Paper
Hormone-regulated dynamics of mRNA distribution on ribosomes in Sertoli cells
Xavier Leray
Julia Morales
Aurélie Tréfier
Kelly León
Thomas Bourquard
Astrid Musnier
Emmanuel Pecnard
Lucile Drobecq
Sandrine Boulben
Nicolas Azzopardi
et al.
01/06/2025
Article
Selection Can Favor a Recombination Landscape That Limits Polygenic Adaptation
Molecular Biology and Evolution , 2025 , 42 (1)
Tom Parée
Luke Noble
Denis Roze
Henrique Teotónio
01/02/2025
Article
Metabolic interdependence and rewiring in radiolaria-microalgae photosymbioses
The International Society of Microbiologial Ecology Journal , 2025 , 19 (1)
Vera Nikitashina
Benjamin Bartels
Joost Samir Mansour
Charlotte Lekieffre
Johan Decelle
Christian Hertweck
Fabrice Not
Georg Pohnert
01/01/2025
Article
Identification and Characterization of a New Thermophilic κ‑Carrageenan Sulfatase
Journal of Agricultural and Food Chemistry , 2025 , 73 , pp. 2044 - 2055
Nanna Rhein-Knudsen
Diego S Reyes-Weiss
Leesa J Klau
Alexandra Jeudy
Thomas Roret
Runar Stokke
Vincent G H Eijsink
Finn L Aachmann
Mirjam Czjzek
Svein Jarle Horn
01/01/2025
Article
Workflow4Metabolomics (W4M): A User-Friendly Metabolomics Platform for Analysis of Mass Spectrometry and Nuclear Magnetic Resonance Data
Current Protocols , 2025 , 5 (2) , pp. e70095
Cédric Delporte
Marie Tremblay-Franco
Yann Guitton
Cécile Canlet
Ralf J. M. Weber
Helge Hecht
Elliott James Price
Jana Klánová
Charlotte Joly
Céline Dalle
et al.
12/18/2024
Preprint, Working Paper
Long-term survey of intertidal rocky shore macrobenthic community metabolism and structure after primary succession
Aline Migné
François Bordeyne
D Davoult
12/13/2024
Ouvrage
Utilisation de l'imagerie hyperspectrale par vecteur drone
Charles Verpoorter
Laurent Brutier
Augustin Leprêtre
François Gevaert
Florian Douay
Aline Migné
Nicolas Spilmont
Gwendoline Duong
12/01/2024
Article
A step in the deep evolution of Alvinellidae (Annelida: Polychaeta): A phylogenomic comparative approach based on transcriptomes
Molecular Phylogenetics and Evolution , 2024 , 201 , pp. 108207
Pierre-Guillaume Brun
Stephane Hourdez
Marion Ballenghien
Yadong Zhou
Jean Mary
Didier Jollivet
11/28/2024
Article
Recovery after exploitation of stalked barnacles is facilitated by the presence of conspecifics: a study of post-harvest gap recolonization dynamics in SW Europe
Reviews in Fish Biology and Fisheries , 2024
Víctor Gómez-del Campo
Julio Arrontes
Teresa Cruz
Elsa Vázquez
Gonzalo Macho
Eric Thiébaut
Katja Geiger
Joana Fernandes
David Jacinto
Alba Aguión
et al.
11/27/2024
Preprint, Working Paper
Gelatinous matrix, an original strategy to cope with oligotrophy in Nassellaria (Radiolaria)
Natalia Llopis Monferrer
Sarah Romac
Manon Laget
Yasuhide Nakamura
Tristan Biard
Miguel Sandin
11/27/2024
Preprint, Working Paper
Phago-mixotrophy of small eukaryotic phytoplankton might alleviate iron limitation in HNLC Southern Ocean
Denise Rui Ying Ong
Andrés Gutiérrez-Rodríguez
Karl Safi
Dominique Marie
Karen Selph
Michael Stukel
Moira Décima
Adriana Lopes dos Santos
11/25/2024
Article
How marine are Marine Stramenopiles (MAST)? A cross-system evaluation
FEMS Microbiology Ecology , 2024 , 100 (11) , pp. fiae130
Aleix Obiol
Javier del Campo
Colomban de Vargas
Frédéric Mahé
Ramon Massana
11/22/2024
Article
Postembryonic Maintenance of Nephron Progenitor Cells with Low Translational Activity in the Chondrichthyan Scyliorhinus canicula
Journal of the American Society of Nephrology , 2024
Yasmine Lund-Ricard
Julien Calloch
Virginie Glippa
Sam Vandenplas
Ann Huysseune
P. Eckhard Witten
Julia Morales
Agnès Boutet
11/20/2024
Poster
Construction d'un jeu de données biogéochimique en Méditerranée nord occidentale consolidé en suivant les principes FAIR,Construction of a biogeochemical dataset in the north-western Mediterranean consolidated following FAIR principles
Aurélien Schmitt
Mark Hoebeke
11/15/2024
Preprint, Working Paper
Year-round quantification, structure and dynamics of epibacterial communities from diverse macroalgae reveal a persistent core microbiota and strong host specificities
Maéva Brunet
Nolwen Le Duff
Tristan Barbeyron
François Thomas
11/14/2024
Preprint, Working Paper
Marine bacterial enrichment in the sea surface microlayer, and surface taxa aerosolization potential in the Western Mediterranean Sea
Julie Dinasquet
Birthe Zäncker
Alessia Nicosia
Estelle Bigeard
Anne-Claire Baudoux
Anja Engel
Cecile Guieu
Ingrid Obernosterer
Karine Sellegri
11/14/2024
Preprint, Working Paper
CarboTag: a modular approach for live and functional imaging of plant cell walls
Maarten Besten
Milan Hendriksz
Lucile Michels
Bénédicte Charrier
Elwira Smakowska-Luzan
Dolf Weijers
Jan Willem Borst
Joris Sprakel
11/12/2024
Article
The physical and mechanical consequences of incorporating industrial residues into mortar and concrete mixtures for eco-friendly marine constructions
Innovative Infrastructure Solutions , 2024 , 9 (12) , pp. 466
Naily Nashira Figueroa
Antonio Brante
Jean-Charles Leclerc
Pablo Salgado
Claudio Oyarzo-Vera
11/08/2024
Preprint, Working Paper
Role of transcription and translation during the early development of the brown alga Ectocarpus
Daniel Liesner
Rémy Luthringer
Sébastien Colin
Julia Morales
J. Mark Cock
Susana Coelho
11/01/2024
Article
Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems
Cell , 2024 , 187 (24) , pp. 6943-6965.e39
France Denoeud
Olivier Godfroy
Corinne Cruaud
Svenja Heesch
Zofia Nehr
Nachida Tadrent
Arnaud Couloux
Loraine Brillet-Guéguen
Ludovic Delage
Dean Mckeown
et al.
11/01/2024
Article
Plant and algal lipidomes: Analysis, composition, and their societal significance
Progress in Lipid Research , 2024 , 96 , pp. 101290
Juliette Jouhet
Eliana Alves
Yohann Boutté
Sylvain Darnet
Frédéric Domergue
Thierry Durand
Pauline Fischer
Laetitia Fouillen
Mara Grube
Jérôme Joubès
et al.
10/31/2024
Article
Benthic foraminifera as bio-indicators of natural and anthropogenic conditions in Roscoff Aber Bay (Brittany, France)
PLoS ONE , 2024 , 19 (10) , pp. e0309463
Edwin Daché
Pierre-Antoine Dessandier
Ranju Radhakrishnan
Valentin Foulon
Loïc Michel
Colomban de Vargas
Jozée Sarrazin
Daniela Zeppilli
10/15/2024
Article
MUM, a maternal unknown message, inhibits early establishment of the medio-lateral axis in the embryo of the kelp Saccharina latissima
Development (Cambridge, England) , 2024 , 151 (20)
Samuel Boscq
Bernard Billoud
Ioannis Theodorou
Tanweer Joemmanbaks
Tanguy Dufourt
Bénédicte Charrier
10/14/2024
Preprint, Working Paper
Chromosome-scale genome assembly and gene annotation of the hydrothermal vent annelid Alvinella pompejana yield insight into animal evolution in extreme environments
Sami El Hilali
Philippe Dru
Alan Le Moan
Yang Li
Martijn Huynen
André Hoelz
Robert Robinson
José Martín-Durán
Didier Jollivet
Adam Claridge-Chang
et al.
10/10/2024
Article
Candidate genes involved in biosynthesis and degradation of the main extracellular matrix polysaccharides of brown algae and their probable evolutionary history
BMC Genomics , 2024 , 25 (1) , pp. 950
Lisa Mazéas
Ahlem Bouguerba-Collin
J. Mark Cock
France Denoeud
Olivier Godfroy
Loraine Brillet-Guéguen
Tristan Barbeyron
Agnieszka Lipinska
Ludovic Delage
Erwan Corre
et al.
10/03/2024
Article
Light color regulation of photosynthetic antennae biogenesis in marine phytoplankton
Plant and Cell Physiology , 2024
David M. Kehoe
Avijit Biswas
Bo Chen
Louison Dufour
Théophile Grébert
Allissa M. Haney
Kes Lynn Joseph
Indika Kumarapperuma
Adam A. Nguyen
Morgane Ratin
et al.
10/01/2024
Article
Disentangling the effect of space, time, and environmental and anthropogenic drivers on coastal macrobenthic β diversity in contrasting habitats over 15 years
Science of the Total Environment , 2024 , 946 , pp. 173919
Chirine Toumi
Olivier Gauthier
Jacques Grall
Éric Thiébaut
Aurélien Boyé
10/01/2024
Article
O short-branch Microsporidia, where art thou? Identifying diversity hotspots for future sampling
European Journal of Protistology , 2024 , 96 , pp. 126119
Megan Gross
Ľubomír Rajter
Frédéric Mahé
David Bass
Cédric Berney
Nicolas Henry
Colomban de Vargas
Micah Dunthorn
09/28/2024
Article
Chromosome-level genome assembly of the bay scallop Argopecten irradians
Scientific Data , 2024 , 11 (1) , pp. 1057
Denis Grouzdev
Emmanuelle Pales Espinosa
Stephen Tettelbach
Sarah Farhat
Arnaud Tanguy
Isabelle Boutet
Nadège Guiglielmoni
Jean-François Flot
Harrison Tobi
Bassem Allam
09/27/2024
Article
“Pink power”—the importance of coralline algal beds in the oceanic carbon cycle
Nature Communications , 2024 , 15 (1) , pp. 8282
Nadine Schubert
Fernando Tuya
Viviana Peña
Paulo Horta
Vinícius Salazar
Pedro Neves
Cláudia Ribeiro
Francisco Otero-Ferrer
Fernando Espino
Kathryn Schoenrock
et al.
09/24/2024
Poster
ILLUMINATING THE DARK KINOME: PRKY MODELING AND VIRTUAL SCREENING
Theo Werth
Morgan Lelievre
Stephane Bach
Thomas Robert
Alban Lepailleur
Johanna Giovannini
09/19/2024
Article
Positive species interactions structure rhodolith bed communities at a global scale
Biological Reviews , 2024 , 907 , pp. 167526
Fabio Bulleri
Nadine Schubert
Jason Hall-Spencer
Daniela Basso
Heidi Burdett
Ronaldo Francini-Filho
Jacques Grall
Paulo Horta
Nicholas Kamenos
Sophie Martin
et al.
09/18/2024
Article
Photophysiology of the haploid form of the cryptophyte Teleaulax amphioxeia
Journal of Phycology , 2024 , 60 (5) , pp. 1220-1236
Sarah Garric
Morgane Ratin
Benoit Gallet
Johan Decelle
Ian Probert
Francisco Rodriguez
Christophe Six
09/17/2024
Article
Constrained Catalytic Itinerary of a Retaining 3,6-Anhydro-D-Galactosidase, a Key Enzyme in Red Algal Cell Wall Degradation
Angewandte Chemie International Edition , 2024 , pp. Online ahead of print
Michael Wallace
Irene Cuxart
Thomas Roret
Laura Guée
Aleksandra Debowski
Mirjam Czjzek
Carme Rovira
Keith Stubbs
Elizabeth Ficko-Blean
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