Our publications
Combination of RNAseq and RADseq to Identify Physiological and Adaptive Responses to Acidification in the Eastern Oyster (Crassostrea virginica)
Caroline Schwaner, Sarah Farhat, Isabelle Boutet, Arnaud Tanguy, Michelle Barbosa, et al.. Combination of RNAseq and RADseq to Identify Physiological and Adaptive Responses to Acidification in the Eastern Oyster (Crassostrea virginica). Marine Biotechnology, 2023, 25 (6), pp.997-1019. ⟨10.1007/s10126-023-10255-y⟩. ⟨hal-04936152⟩
Unmasking microsatellite deceptiveness and debunking hybridization with SNPs in four marine copepod species of Calanus
Marvin Choquet, Apollo Lizano, Alan Le Moan, Mark Ravinet, Anusha Dhanasiri, et al.. Unmasking microsatellite deceptiveness and debunking hybridization with SNPs in four marine copepod species of Calanus. Molecular Ecology, 2023, 32 (24), pp.6854-6873. ⟨10.1111/mec.17183⟩. ⟨hal-04936153⟩
Management and conservation implications of cryptic population substructure for two commercially exploited fishes ( Merluccius spp.) in southern Africa
Sarah Forde, Sophie von der Heyden, Alan Le Moan, Erica Nielsen, Deon Durholtz, et al.. Management and conservation implications of cryptic population substructure for two commercially exploited fishes ( Merluccius spp.) in southern Africa. Molecular Ecology Resources, 2023, ⟨10.1111/1755-0998.13820⟩. ⟨hal-04936154⟩
Reproductive biology of the two main reef-building cold-water coral species (Desmophyllum pertusum and Madrepora oculata) in the Mediterranean Sea
M. Chemel, A.L. Meistertzheim, V. Mouchi, F. Lartaud. Reproductive biology of the two main reef-building cold-water coral species (Desmophyllum pertusum and Madrepora oculata) in the Mediterranean Sea. Deep Sea Research Part I: Oceanographic Research Papers, 2023, 195, pp.103984. ⟨10.1016/j.dsr.2023.103984⟩. ⟨hal-04001430⟩
Evaluation of Sub-Antarctic and Antarctic sea urchins’ thermal reaction norm through righting behavior and comparison with in situ measurements
Camille Détrée, Jorge Navarro, Ignacio Garrido, Paulina Bruning, Jean-Charles Leclerc. Evaluation of Sub-Antarctic and Antarctic sea urchins’ thermal reaction norm through righting behavior and comparison with in situ measurements. Journal of Thermal Biology, 2023, 112, pp.103496. ⟨10.1016/j.jtherbio.2023.103496⟩. ⟨hal-04936155⟩
The Source-to-Sink Vade-mecum: History, Concepts and Tools
Sébastien Castelltort, Charlotte Fillon, Eric Lasseur, Alexandre Ortiz, Cécile Robin, et al.. The Source-to-Sink Vade-mecum: History, Concepts and Tools. Society for Sedimentary Geology (SPEM), 16, pp.72, 2023, Concepts in Sedimentology and Paleontology, 978-1-56576-379-1. ⟨10.2110/sepmcsp.16⟩. ⟨hal-04285428⟩
The great shift: The non-indigenous species Ammonia confertitesta (Foraminifera, Rhizaria) outcompetes indigenous Ammonia species in the Gironde estuary (France)
Jean-Charles Pavard, Julien Richirt, Laurent Seuront, Hugues Blanchet, Marie P.A. Fouet, et al.. The great shift: The non-indigenous species Ammonia confertitesta (Foraminifera, Rhizaria) outcompetes indigenous Ammonia species in the Gironde estuary (France). Estuarine, Coastal and Shelf Science, 2023, 289, pp.108378. ⟨10.1016/j.ecss.2023.108378⟩. ⟨hal-04364649⟩
BIOGEOCHEMICAL dataset collected during the TONGA cruise
Cécile Guieu, Sophie Bonnet, Fatima Abadou, Samir Alliouane, Sophie Arnaud-Haond, et al.. BIOGEOCHEMICAL dataset collected during the TONGA cruise. 2023, https://doi.org/10.17882/88169. ⟨hal-05291643⟩
Causes and consequences of linkage disequilibrium among transposable elements within eukaryotic genomes
Denis Roze. Causes and consequences of linkage disequilibrium among transposable elements within eukaryotic genomes. Genetics, 2023, 224 (2), pp.iyad058. ⟨10.1093/genetics/iyad058⟩. ⟨hal-04936267⟩
Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems
Daniel Richter, Romain Watteaux, Thomas Vannier, Jade Leconte, Paul Frémont, et al.. Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems. eLife, 2022, 11, pp.e78129. ⟨10.7554/eLife.78129⟩. ⟨hal-02399723v2⟩
The spatio-temporal dynamics of interacting genetic incompatibilities. Part I: The case of stacked underdominant clines
Matthieu Alfaro, Quentin Griette, Denis Roze, Benoît Sarels. The spatio-temporal dynamics of interacting genetic incompatibilities. Part I: The case of stacked underdominant clines. Journal of Mathematical Biology, 2022, 84 (3), pp.20. ⟨10.1007/s00285-022-01722-6⟩. ⟨hal-03109887v2⟩
Swarm v3: towards tera-scale amplicon clustering
Frédéric Mahé, Lucas Czech, Alexandros Stamatakis, Christopher Quince, Colomban de Vargas, et al.. Swarm v3: towards tera-scale amplicon clustering. Bioinformatics, 2022, 38 (1), pp.267-269. ⟨10.1093/bioinformatics/btab493⟩. ⟨hal-03284105⟩