Hal Archives
02/13/2024
Article
The global genetic diversity of planktonic foraminifera reveals the structure of cryptic speciation in plankton
Biological Reviews , 2024 , 99 (4) , pp. 1218–1241
Raphaël Morard
Kate Darling
Agnes Weiner
Christiane Hassenrück
Chiara Vanni
Tristan Cordier
Nicolas Henry
Mattia Greco
Nele Vollmar
Tamara Milivojevic
et al.
02/12/2024
Article
The evosystem: A centerpiece for evolutionary studies
BioEssays , 2024 , 46 (4)
François Papale
Fabrice Not
Éric Bapteste
Louis‐patrick Haraoui
01/24/2024
Article
The Gárdos Channel and Piezo1 Revisited: Comparison between Reticulocytes and Mature Red Blood Cells
International Journal of Molecular Sciences , 2024 , 25 (3) , pp. 1416
Polina Petkova-Kirova
Nicoletta Murciano
Giulia Iacono
Julia Jansen
Greta Simionato
Min Qiao
Carmen van der Zwaan
Maria Giustina Rotordam
Thomas John
Laura Hertz
et al.
01/22/2024
Article
Phage-inducible chromosomal minimalist islands (PICMIs), a novel family of small marine satellites of virulent phages,Îlots chromosomiques minimalistes induits par les phages (PICMI), une nouvelle famille de petits satellites marins de phages viru...
Nature Communications , 2024 , 15 (1) , pp. 664
Rubén Barcia-Cruz
David Goudenège
Jorge Moura de Sousa
Damien Piel
Martial Marbouty
Eduardo Rocha
Frédérique Le Roux
01/19/2024
Preprint, Working Paper
The European Reference Genome Atlas: piloting a decentralised approach to equitable biodiversity genomics
Ann M Mc Cartney
Giulio Formenti
Alice Mouton
Diego de Panis
Luísa S Marins
Henrique G Leitão
Genevieve Diedericks
Joseph Kirangwa
Marco Morselli
Judit Salces-Ortiz
et al.
01/16/2024
Article
On the influence of bed roughness on saltation in inertial regime
Earth Surface Processes and Landforms , 2024 , 49 (4) , pp. 1303-1315
Gaspard Minster
France Floc'H
Alexandre Valance
Nicolas Le Dantec
Amandine Nicolle
Benoit Zerr
01/10/2024
Article
Structurally stable but functionally disrupted marine microbial communities under a future climate change scenario: Potential importance for nitrous oxide emissions
Science of the Total Environment , 2024 , 907
Annabelle Dairain
Helena Voet
Anna-Maria Vafeiadou
Nele de Meester
Annelien Rigaux
Carl van Colen
Jan Vanaverbeke
Tom Moens
01/09/2024
Poster
LIM kinases from small molecule inhibitors to tools for chemical biology
Sylvain Routier
Rayan Berabez
Anthony Champiré
Abdennour Braka
Aurélie Cosson
Justine Corret
Samia Aci-Sèche
Pascal Bonnet
Béatrice Joselin
Sandrine Ruchaud
et al.
01/08/2024
Article
Establishing the ELIXIR Microbiome Community
F1000Research , 2024 , 13 , pp. 50
Robert D Finn
Bachir Balech
Josephine Burgin
Physilia Chua
Erwan Corre
Cymon J Cox
Claudio Donati
Vitor Martins dos Santos
Bruno Fosso
John Hancock
et al.
01/01/2024
Article
Multi-scale patterns in the structure of fish and fouling communities associated with seaweeds in marinas
Marine Ecology Progress Series , 2024 , 742 , pp. 1-19
Jean‐charles Leclerc
Maéva Gonzalez
Jean-Philippe Pezy
Aurore Raoux
Romain Crec'Hriou
Caroline Broudin
Céline Houbin
Aline Migné
Stéphane Loisel
Laure Sevin
et al.
01/01/2024
Article
Novel Thiazole-Fused [4,5-g] or [5,4-g]Quinazolin-8-ones and Their Quinazoline Analogues: Synthesis and Biological Evaluation
Pharmaceuticals , 2024 , 17 (11) , pp. 1452
Nathan Broudic
Alexandra Pacheco-Benichou
Cecile Corbiere
Blandine Baratte
Thomas Robert
Stéphane Bach
Hélène Solhi
Rémy Le Guével
Corinne Fruit
Thierry Besson
01/01/2024
Article
Progress and future directions for seaweed holobiont research
New Phytologist , 2024 , 244 (2) , pp. 364-376
Mahasweta Saha
Simon M Dittami
Cheong Xin Chan
Jean‐baptiste Raina
Willem Stock
Fatemeh Ghaderiardakani
Ann Mary Valathuparambil Baby John
Shauna Corr
Guy Schleyer
Jonathan Todd
et al.
01/01/2024
Article
Cell-Autonomous and Non-Cell-Autonomous Mechanisms Concomitantly Regulate the Early Developmental Pattern in the Kelp Saccharina latissima Embryo
Plants , 2024 , 13 (10) , pp. 1341
Samuel Boscq
Bernard Billoud
Bénédicte Charrier
01/01/2024
Article
Beyond the kidney biopsy: genomic approach to undetermined kidney diseases
Clinical Kidney Journal , 2024 , 17 (1)
Thomas Robert
Laure Raymond
Marine Dancer
Julia Torrents
Noemie Jourde-Chiche
Stéphane Burtey
Christophe Beroud
Laurent Mesnard
01/01/2024
Article
From reproductive behaviour to responses to predators: Ocean acidification does not impact the behaviour of an herbivorous marine gastropod
Science of the Total Environment , 2024 , 907 , pp. 167526
Sabine Roussel
Manon Coheleach
Sophie Martin
Rob Day
Aicha Badou
Sylvain Huchette
Philippe Dubois
Arianna Servili
Fanny Gaillard
Stéphanie Auzoux-Bordenave
01/01/2024
Article
Physiological differences among cryptic species of the Mediterranean crustose coralline alga Lithophyllum stictiforme (Corallinales, Rhodophyta)
European Journal of Phycology , 2024 , (2024 - Issue 2) , pp. Pages 184-195
Sophie Martin
Virgile Calvert
Anne Chenuil
01/01/2024
Rapport
Plankton-based solutions to support life on our planet : 4 CO2 sink carbon and mitigate climate change
André Abreu
David Johns
Haimanti Biswas
Andrew Knoll
Hubert Bonnefond
Xiamen Lin Xin
Chris Bowler
Thulani Makhalanyane
Jean-Paul Cadoret
Abigail McQuatters-Gollop
et al.
01/01/2024
Chapître d'ouvrage
Acclimatation saisonnière chez la macroalgue Fucus serratus
François Gevaert
Gwendoline Duong
Florian Douay
Marvin Meresse
Lionel Denis
Aline Migné
01/01/2024
Article
18S and ITS2 rRNA gene sequence-structure phylogeny of the Phaeophyceae (SAR, Stramenopiles) with special reference to Laminariales
European Journal of Protistology , 2024 , 95 , pp. 126107
Leon Berchtenbreiter
Abdullah Emir Mumcu
Antonia Stephanie Rackevei
J. Mark Cock
Hiroshi Kawai
Matthias Wolf
01/01/2024
Article
Reproductive biology and population structure of three hydrothermal gastropods (Lepetodrilus schrolli, L. fijiensis and Shinkailepas tollmanni) from the South West Pacific back-arc basins
Marine Biology , 2024 , 171 (1) , pp. 31
Camille Poitrimol
Marjolaine Matabos
Alicia Veuillot
Annah Ramière
Thierry Comtet
Cedric Boulart
Cecile Cathalot
Éric Thiébaut
01/01/2024
Article
A step towards measuring connectivity in the deep sea: elemental fingerprints of mollusk larval shells discriminate hydrothermal vent sites
Biogeosciences , 2024 , 21 (1) , pp. 145-160
Vincent Mouchi
Christophe Pécheyran
Fanny Claverie
Cécile Cathalot
Marjolaine Matabos
Yoan Germain
Olivier Rouxel
Didier Jollivet
Thomas Broquet
Thierry Comtet
01/01/2024
Article
Highly structured populations of copepods at risk to deep‐sea mining: Integration of genomic data with demogenetic and biophysical modelling
Molecular Ecology , 2024 , 33 (9) , pp. e17340
Coral Diaz‐recio Lorenzo
Adrien Tran Lu Y
Otis Brunner
Pedro Martínez Arbizu
Didier Jollivet
Stefan Laurent
Sabine Gollner
01/01/2024
Article
Tetrahydropyridine LIMK inhibitors: Structure activity studies and biological characterization
European Journal of Medicinal Chemistry , 2024 , 271 , pp. 116391-116391
Anthony Champiré
Rayan Berabez
Abdennour Braka
Aurélie Cosson
Justine Corret
Caroline Girardin
Amandine Serrano
Samia Aci-Seche
Pascal Bonnet
Béatrice Josselin
et al.
01/01/2024
Article
On the specific status of eastern Mediterranean Dendrophyllia corals (Cnidaria, Anthozoa): Genetic characterization and speciation scenarios
Zoologica Scripta , 2024 , 53 (2) , pp. 235-247
Didier Aurelle
Anne Haguenauer
Chloé Blaise
Lauric Reynes
Sophie Arnaud-Haond
Joana Boavida
Cédric Cabau
Christophe Klopp
Tomas Lundalv
Camille Noûs
et al.
12/01/2023
Article
Carrageenan biosynthesis in red algae: A review
The Cell Surface , 2023 , 9 , pp. 100097
Antonin Chevenier
Diane Jouanneau
Elizabeth Ficko-Blean
12/01/2023
Article
Differences in carbonate chemistry up-regulation of long-lived reef-building corals
Scientific Reports , 2023 , 13 (1) , pp. 11589
Marine Canesi
Eric Douville
Paolo Montagna
Marco Taviani
Jarosław Stolarski
Louise Bordier
Arnaud Dapoigny
Gninwoyo Eric Hermann Coulibaly
Anne-Catherine Simon
Mathieu Agelou
et al.
12/01/2023
Article
Host transcriptomic plasticity and photosymbiotic fidelity underpin $Pocillopora$ acclimatization across thermal regimes in the Pacific Ocean
Nature Communications , 2023 , 14 , pp. 3056
Eric J Armstrong
Julie Lê-Hoang
Quentin Carradec
Jean-Marc Aury
Benjamin Noel
Benjamin C C Hume
Christian R Voolstra
Julie Poulain
Caroline Belser
David A Paz-García
et al.
12/01/2023
Article
Diversity of the Pacific Ocean coral reef microbiome
Nature Communications , 2023 , 14 (1) , pp. 3039
Pierre Galand
Hans-Joachim Ruscheweyh
Guillem Salazar
Corentin Hochart
Nicolas Henry
Benjamin Hume
Pedro Oliveira
Aude Perdereau
Karine Labadie
Caroline Belser
et al.
12/01/2023
Article
Endogenous viral elements reveal associations between a non-retroviral RNA virus and symbiotic dinoflagellate genomes
Communications Biology , 2023 , 6 (1) , pp. 566
Alex Veglia
Kalia Bistolas
Christian Voolstra
Benjamin Hume
Hans-Joachim Ruscheweyh
Serge Planes
Denis Allemand
Emilie Boissin
Patrick Wincker
Julie Poulain
et al.
12/01/2023
Article
Ecology of Endozoicomonadaceae in three coral genera across the Pacific Ocean
Nature Communications , 2023 , 14 (1) , pp. 3037
Corentin Hochart
Lucas Paoli
Hans-Joachim Ruscheweyh
Guillem Salazar
Emilie Boissin
Sarah Romac
Julie Poulain
Guillaume Bourdin
Guillaume Iwankow
Clémentine Moulin
et al.
12/01/2023
Article
Ocean-wide comparisons of mesopelagic planktonic community structures
ISME Communications , 2023 , 3 (1)
Janaina Rigonato
Marko Budinich
Alejandro Murillo
Manoela Brandão
Juan Pierella Karlusich
Yawouvi Dodji Soviadan
Ann Gregory
Hisashi Endo
Florian Kokoszka
Dean Vik
et al.
12/01/2023
Article
Top abundant deep ocean heterotrophic bacteria can be retrieved by cultivation
ISME Communications , 2023 , 3 (1)
Isabel Sanz-Sáez
Pablo Sánchez
Guillem Salazar
Shinichi Sunagawa
Colomban de Vargas
Chris Bowler
Matthew Sullivan
Patrick Wincker
Eric Karsenti
Carlos Pedrós-Alió
et al.
11/17/2023
Article
Global perspective of environmental distribution and diversity of Perkinsea (Alveolata) explored by a meta-analysis of eDNA surveys
Scientific Reports , 2023 , 13 (1) , pp. 20111
Sebastian Metz
Sarah Itoïz
Aleix Obiol
Evelyne Derelle
Ramon Massana
Cédric Berney
Colomban de Vargas
Philippe Soudant
Adam Monier
Aurélie Chambouvet
11/13/2023
Article
Taxonomic and nomenclatural notes on the coccolithophore Gephyrocapsa huxleyi (Noelaerhabdaceae, Haptophyta) and related species
Notulae algarum , 2023 , 307 , pp. 1-9
Odysseas A. Archontikis
Ian Probert
Luc Beaufort
Rosalind E.M. Rickaby
Dmitry A. Filatov
El Mahdi Bendif
11/01/2023
Article
Quinazoline-based VEGFR-2 inhibitors as potential anti-angiogenic agents: A contemporary perspective of SAR and molecular docking studies
European Journal of Medicinal Chemistry , 2023 , 259 , pp. 115626
Mahfam Moradi
Alireza Mousavi
Zahra Emamgholipour
Johanna Giovannini
Setareh Moghimi
Fariba Peytam
Amin Honarmand
Stéphane Bach
Alireza Foroumadi
10/30/2023
Article
Unmasking microsatellite deceptiveness and debunking hybridization with SNPs in four marine copepod species of Calanus
Molecular Ecology , 2023 , 32 (24) , pp. 6854-6873
Marvin Choquet
Apollo Lizano
Alan Le Moan
Mark Ravinet
Anusha Dhanasiri
Galice Hoarau
10/26/2023
Preprint, Working Paper
Novel laminarin-binding CBMs in multimodular proteins of marine Bacteroidota feature prominently in phytoplankton blooms
Marie-Katherin Zühlke
Elizabeth Ficko-Blean
Daniel Bartosik
Nicolas Terrapon
Alexandra Jeudy
Murielle Jam
Fengqing Wang
Norma Welsch
Robert Larocque
Diane Jouanneau
et al.
10/13/2023
Article
Maintaining beneficial alga-associated bacterial communities under heat stress: Insights from controlled co-culture experiments using antibiotic-resistant bacterial strains
FEMS Microbiology Ecology , 2023 , 99 (12) , pp. fiad130
Elham Karimi
Simon Dittami
10/09/2023
Article
Potassium 6-Oxo-7,13,16,22-tetraazatetracyclo[12.6.2.18,12.017,21]tricosa-1(20),8(23),9,11,14,16,18,21-octaen-2-yne-15-carboxylate
Molbank , 2023 , 2023 (4) , pp. M1735
Camille Blouet
Stéphanie Letast
Thomas Robert
Stéphane Bach
Noël Pinaud
Nicolas Joubert
Marie-Claude Viaud-Massuard
Jean Guillon
Cédric Logé
Caroline Denevault-Sabourin
10/06/2023
Article
Adverse effects of delta‐9‐tetrahydrocannabinol on sickle red blood cells
American Journal of Hematology , 2023 , 98 (12)
Aline Hatem
Sofia Esperti
Nicoletta Murciano
Min Qiao
Maria Giustina Rotordam
Nadine Becker
Elie Nader
Felix Maurer
Laurent Pérès
Guillaume Bouyer
et al.
10/01/2023
Article
Long‐term population decline of a genetically homogeneous continental‐wide top Arctic predator
Ibis , 2023 , 165 (4) , pp. 1251-1266
Marianne Gousy-Leblanc
Jean‐françois Therrien
Thomas Broquet
Delphine Rioux
Nadine Curt-Grand-Gaudin
Nathalie Tissot
Sophie Tissot
Ildiko Szabo
Laurie Wilson
Jack Evans
et al.
09/14/2023
Comm. dans un congrès
Hibernation in brown bears: A model for medical and space research
Etienne Lefai
Cécile Coudy-Gandilhon
Fourneaux Guillaume
Chloé Richard
Pourpe Charlène
Geffroy Alexandre
Lydie Combaret
Fabrice Bertile
09/13/2023
Article
Sexual selection in seaweed? Testing Bateman's principles in the red alga Gracilaria gracilis
Proceedings of the Royal Society B: Biological Sciences , 2023 , 290 (2006) , pp. 20231668
Emma Lavaut
Myriam Valero
Stéphane Mauger
Marie-Laure Guillemin
Christophe Destombe
Mathilde Dufaÿ
09/08/2023
Article
Asymmetric dimerization in a transcription factor superfamily is promoted by allosteric interactions with DNA
Nucleic Acids Research , 2023 , 51 (16) , pp. 8864-8879
Abdul Kareem Mohideen Patel
Pierre Vilela
Tajith Baba Shaik
Alastair G Mcewen
Isabelle Hazemann
Karl Brillet
Eric Ennifar
Ali Hamiche
Gabriel V Markov
Vincent Laudet
et al.
09/02/2023
Article
Aldehyde perception induces specific molecular responses in Laminaria digitata and affects algal consumption by a specialist grazer
The Plant Journal , 2023
Qikun Xing
Léa Cabioch
Antoine Desrut
Gildas Le Corguillé
Sylvie Rousvoal
Laurence Dartevelle
Elodie Rolland
Yann Guitton
Philippe Potin
Gabriel V Markov
et al.
08/28/2023
Preprint, Working Paper
Workflow for SNP genotyping using the Hi-Plex method v2
Anne-Laure Besnard
Daniel J. Park
Bernard J.
Fleur M.A. Hammet
Sophie Michon-Coudouel
Marine Biget
Stacy A. Krueger-Hadfield
Stéphane Mauger
Eric J. Petit
08/23/2023
Article
Beyond the limits of the unassigned protist microbiome: inferring large-scale spatio-temporal patterns of marine parasites
ISME Communications , 2023 , 3 (16)
Iris Rizos
Pavla Debeljak
Thomas Finet
Dylan Klein
Sakina-Dorothée Ayata
Fabrice Not
Lucie Bittner
08/19/2023
Comm. dans un congrès
Targeted CRISPR-Cas9-based gene knockouts in Aphanomyces euteiches
Laurent Camborde
Bernard Dumas
Elodie Gaulin
Yacine Badis
08/19/2023
Article
Inter-comparison of marine microbiome sampling protocols
ISME Communications , 2023 , 3 (1) , pp. 84
Francisco Pascoal
Maria Paola Tomasino
Roberta Piredda
Grazia Marina Quero
Luís Torgo
Julie Poulain
Pierre E. Galand
Jed A Fuhrman
Alex Mitchell
Tinkara Tinta
et al.
08/17/2023
Article
Whole-genome phylogeography of the intertidal snail Littorina saxatilis
Evolutionary Journal of the Linnean Society , 2023 , 2 (1)
Sean Stankowski
Zuzanna B Zagrodzka
Juan Galindo
Mauricio Montaño-Rendón
Rui Faria
Natalia Mikhailova
April M H Blakeslee
Einar Arnason
Thomas Broquet
Hernán E Morales
et al.
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