Hal Archives
08/01/2015
Article
Patchiness of deep-sea communities in Papua New Guinea and potential susceptibility to anthropogenic disturbances illustrated by seep organisms
Marine Ecology , 2015 , 36 (Issue Supplement S1) , pp. 109-132
Sarah Samadi
Nicolas Puillandre
Eric Pante
Marie-Catherine Boisselier
Wei-Jen Chen
Laure Corbari
Philippe Maestrati
Ralph Mana
Justine Thubaut
Dario Zuccon
et al.
07/25/2015
Article
MicRhoDE: a curated database for the analysis of microbial rhodopsin diversity and evolution
Database - The journal of Biological Databases and Curation , 2015 , 2015 , pp. bav080
Dominique Boeuf
Stéphane Audic
Loraine Brillet-Guéguen
Christophe Caron
Christian Jeanthon
07/17/2015
Article
Amelotin Gene Structure and Expression during Enamel Formation in the Opossum Monodelphis domestica
PLoS ONE , 2015 , 10 (7) , pp. e0133314
Barbara Gasse
Xi Liu
Erwan Corre
Jean-Yves Sire
07/16/2015
Article
Selective forces acting during multi‑domain protein evolution: the case of multi‑domain globins
SpringerPlus , 2015 , 4 , pp. 354
Joana Cristina Projecto‑garcia
Didier Jollivet
Jean Mary
François Lallier
Stephen W Shaeffer
Stéphane Hourdez
07/06/2015
Article
Crassostrea gigas mortality in France: the usual suspect, a herpes virus, may not be the killer in this polymicrobial opportunistic disease
Frontiers in Microbiology , 2015 , 6 , pp. 686
Bruno Petton
Maxime Bruto
Adèle James
Yannick Labreuche
Marianne Alunno-Bruscia
Frédérique Le Roux
07/06/2015
Poster
Workflow4Metabolomics: A collaborative research infrastructure for computational metabolomics
Mélanie Pétéra
Gildas Le Corguille
Marion Landi
Misharl Monsoor
Marie Tremblay-Franco
Jean-Francois Martin
Christophe Duperier
Daniel Jacob
Yann Guitton
Marie Lefebvre
et al.
07/01/2015
Article
Relative abundances of methane- and sulfur-oxidizing symbionts in gills of the deep-sea hydrothermal vent mussel Bathymodiolus azoricus under pressure
Deep Sea Research Part I: Oceanographic Research Papers , 2015 , 101 , pp. 7-13
Kamil M. Szafranski
Bérénice Piquet
Bruce Shillito
François Lallier
Sébastien Duperron
07/01/2015
Article
Comprehensive Functional Analysis of the 18 Vibrio cholerae N16961 Toxin-Antitoxin Systems Substantiates Their Role in Stabilizing the Superintegron.
Journal of Bacteriology , 2015 , 197 (13) , pp. 2150-9
Naeem Iqbal
Anne-Marie Guérout
Evelyne Krin
Frédérique Le Roux
Didier Mazel
07/01/2015
Article
Canopy interactions and physical stress gradients in subtidal communities
Ecology Letters , 2015 , 18 (7) , pp. 677–686
Scott Bennett
Thomas Wernberg
Thibaut de Bettignies
Gary A Kendrick
Robert J Anderson
John J Bolton
Kirsten Rodgers
Nick Shears
Jean-Charles Leclerc
Laurent Lévêque
et al.
07/01/2015
Article
The hydrological context determines the beta-diversity of aerobic anoxygenic phototrophic bacteria in European Arctic seas but does not favor endemism
Frontiers in Microbiology , 2015 , 6 , pp. 638
Anne-Catherine Lehours
Christian Jeanthon
07/01/2015
Article
Environmental Monitoring: Inferring the Diatom Index from Next-Generation Sequencing Data
Environmental Science and Technology , 2015 , 49 (13) , pp. 7597–7605
Joana Amorim Visco
Laure Apothéloz-Perret-Gentil
Arielle Cordonier
Philippe Esling
Loïc Pillet
Jan Pawlowski
07/01/2015
Poster
Convergence/conservation of immune processes involved in the establishment of ectosymbiosis between coastal and hydrothermal annelids inhabiting extreme environment
L. Roisin
C. Papot
C. Boidin-Wichlacz
D. Jollivet
L. Lesven
V. Cuvillier-Hot
J. Mary,
S. Duperron
S. Hourdez
A. Tasiemski
07/01/2015
Article
Populations, not clones, are the unit of vibrio pathogenesis in naturally infected oysters
ISME Journal , 2015 , 9 (7) , pp. 1523-1531
Astrid Lemire
David Goudenège
Typhaine Versigny
Bruno Petton
Alexandra Calteau
Yannick Labreuche
Frédérique Le Roux
06/30/2015
Rapport
Prospective scientifique pour la recherche française sur la biodiversité
Martine Antona
Raphaël Arlettaz
Bernard Bodo
Jean-Pierre Boude
Pierre Boudry
Thierry Bourgoin
Catherine Boyen
Marie-Christine Cormier-Salem
Franck Courchamp
Denis Couvet
et al.
06/18/2015
Article
Evolution and maintenance of haploid-diploid life cycles in natural populations: the case of the marine brown alga Ectocarpus
Evolution - International Journal of Organic Evolution , 2015 , 69 (7) , pp. 1808–1822
Lucia Couceiro
Mickael Le Gac
Heather M. Hunsperger
Stéphane Mauger
Christophe Destombe
J. Mark Cock
Sophia Ahmed
Susana M Coelho
Myriam Valero
Akira F Peters
06/15/2015
Article
Comparative analysis of symbiont ratios and gene expression in natural populations of two Bathymodiolus mussel species
Symbiosis , 2015 , 63 (1) , pp. 19-29
H. Guezi
Isabelle Boutet
Ann C. Andersen
F. Lallier
Arnaud Tanguy
06/09/2015
Poster
New tools and workflows on W4M, the Galaxy metabolomic infrastructure
Marion Landi
Claire Lopez
Marie Tremblay-Franco
Cécile Canlet
Yann Guitton
Daniel Jacob
Gildas Le Corguillé
Jean-Francois Martin
Misharl Monsoor
Nils Paulhe
et al.
06/01/2015
Article
Significance of Plankton Community Structure and Nutrient Availability for the Control of Dinoflagellate Blooms by Parasites: A Modeling Approach
PLoS ONE , 2015 , 10 (6) , pp. e0127623
Catharina Alves-De-Souza
David Pecqueur
Emilie Le Floc'H
Sébastien Mas
Cécile Roques
Behzad Mostajir
Franscesca Vidussi
Lourdes Velo-Suárez
Marc Sourisseau
Eric Fouilland
et al.
06/01/2015
Article
Constitutive or Inducible Protective Mechanisms against UV-B Radiation in the Brown Alga Fucus vesiculosus? A Study of Gene Expression and Phlorotannin Content Responses
PLoS ONE , 2015 , 10 (6) , pp. e0128003
Emeline Creis
Ludovic Delage
Sophie Charton
Sophie Goulitquer
Catherine Leblanc
Philippe Potin
Erwan Ar Gall
06/01/2015
Article
Constitutive or Inducible Protective Mechanisms against UV-B Radiation in the Brown Alga Fucus vesiculosus? A Study of Gene Expression and Phlorotannin Content Responses
PLoS ONE , 2015 , 10 (6) , pp. e0128003
Emeline Creis
Ludovic Delage
Sophie Charton
Sophie Goulitquer
Catherine Leblanc
Philippe Potin
Erwan Ar Gall
06/01/2015
Autre document
Les Biotechnologies Marines dans le Grand Ouest
, 2015 , pp. 61 p
Catherine Boyen
Pascal Jaouen
06/01/2015
Article
Increasing mitochondrial muscle fatty acid oxidation induces skeletal muscle remodeling toward an oxidative phenotype
FASEB Journal , 2015 , 29 (6) , pp. 2473-2483
Carole Henique
Abdelhak Mansouri
Eliska Vavrova
Veronique Lenoir
Arnaud Ferry
Catherine Esnous
Elodie Ramond
Jean Girard
Frederic F. Bouillaud
Carina Prip-Buus
et al.
06/01/2015
Chapître d'ouvrage
High-Throughput Screening of marine resources
Arnaud Hochard
Luc Reininger
Sandrine Ruchaud
Stéphane Bach
05/25/2015
Article
The Observatory on LAkes (OLA) database: Sixty years of environmental data accessible to the public
Annales de Limnologie - International Journal of Limnology , 2015
Frédéric Rimet
Orlane Anneville
Denis Barbet
Cécile Chardon
Laura Crepin
Isabelle Domaizon
Jean-Marcel Dorioz
Laurent Espinat
Victor Frossard
Jean Guillard
et al.
05/21/2015
Article
Environmental characteristics of Agulhas rings affect interocean plankton transport
Science , 2015 , 348 (6237) , pp. 1261447 - 1261447
Emilie Villar
Gregory Farrant
Michael Follows
Laurence Garczarek
Sabrina Speich
Stéphane Audic
Lucie Bittner
Bruno Blanke
Jennifer R. Brum
Christophe Brunet
et al.
05/21/2015
Article
Patterns and ecological drivers of ocean viral communities
Science , 2015 , 348 (6237) , pp. 1261498
Jennifer Brum
J Cesar Ignacio-Espinoza
Simon Roux
Guilhem Doulcier
Silvia G. Acinas
Adriana A. Alberti
Samuel Chaffron
Corinne Cruaud
Colomban de Vargas
Josep Gasol
et al.
05/01/2015
Article
Metabolic responses to temperature stress under elevated pCO2 in Crepidula fornicata
Journal of Molluscan Studies , 2015 , 81 (2) , pp. 238-246
Fanny Noisette
Joelle Richard
Ines Le Fur
Lloyd S. Peck
Dominique Davoult
Sophie Martin
05/01/2015
Article
Photosynthetic activity and productivity of intertidal macroalgae: in situ measurements, from thallus to community scale
Aquatic Botany , 2015 , 123 , pp. 6-12
Aline Migné
Gaspard Delebecq
Dominique Davoult
Nicolas Spilmont
Dominique Menu
François Gévaert
05/01/2015
Article
Photosynthetic activity and productivity of intertidal macroalgae: in situ measurements, from thallus to community scale
Aquatic Botany , 2015 , 123 , pp. 6-12
Aline Migné
Gaspard Delebecq
Dominique Davoult
Nicolas Spilmont
Dominique Menu
François Gévaert
05/01/2015
Article
Investigation of the functional properties and subcellular localization of alpha human and rainbow trout estrogen receptors within a unique yeast cellular context
Journal of Steroid Biochemistry and Molecular Biology , 2015 , 149 , pp. 17-26
Adélaïde Le Grand
Anthony Bouter
Anne Couturier
Odile Mulner-Lorillon
Xavier Le Goff
Franck Chesnel
Olivier Sire
Véronique Le Tilly
05/01/2015
Article
Paralytic shellfish toxin content is related to genomic sxtA4 copy number in Alexandrium minutum strains
Frontiers in Microbiology , 2015 , 6 , pp. 404
Anke Stüken
Pilar Riobó
José Franco
Kjetill S. Jakobsen
Laure Guillou
Rosa I. Figueroa
05/01/2015
Article
Structure and function of the global ocean microbiome
Science , 2015 , 348 (6237) , pp. 1261359
Shinichi Sunagawa
Luis Pedro Coelho
Samuel Chaffron
Jens Roat Kultima
Karine Labadie
Guillem Salazar
Bardya Djahanschiri
Georg Zeller
Daniel R. Mende
Adriana A. Alberti
et al.
05/01/2015
Article
Phaeocystis rex sp nov (Phaeocystales, Prymnesiophyceae): a new solitary species that produces a multilayered scale cell covering
European Journal of Phycology , 2015 , 50 (2) , pp. 207-222
Robert A. Andersen
J. Craig Bailey
Johan Decelle
Ian Probert
05/01/2015
Article
Expansion of the `Reticulosphere': Diversity of Novel Branching and Network-forming Amoebae Helps to Define Variosea (Amoebozoa)
Protist , 2015 , 166 (2) , pp. 271-295
Cédric Berney
Stefan Geisen
Jeroen van Wichelen
Frank Nitsche
Pieter Vanormelingen
Michael Bonkowski
David Bass
05/01/2015
Article
Tara Oceans studies plankton at PLANETARY SCALE
Science , 2015 , 348 (6237) , pp. 873
P. Bork
C. Bowler
Colomban de Vargas
G. Gorsky
E. Karsenti
P. Wincker
05/01/2015
Article
Sweet and sour sugars from the sea: the biosynthesis and remodeling of sulfated cell wall polysaccharides from marine macroalgae
Perspectives in Phycology , 2015 , 2 (1) , pp. 51 - 64
Elizabeth Ficko-Blean
Cécile Hervé
Gurvan Michel
04/17/2015
Article
Investigating isotopic functional indices to reveal changes in the structure and functioning of benthic communities
Functional Ecology , 2015 , 29 (10) , pp. 1350–1360
Carinne Rigolet
Éric Thiébaut
Anik Brind 'Amour
Stanislas F. Dubois
04/02/2015
Article
Diversification, Evolution and Sub-Functionalization of 70kDa Heat-Shock Proteins in Two Sister Species of Antarctic Krill: Differences in Thermal Habitats, Responses and Implications under Climate Change
PLoS ONE , 2015 , 10 (4) , pp. e0121642
Kévin Cascella
Didier Jollivet
Claire Papot
Nelly Léger
Erwan Corre
Juliette Ravaux
Melody S. Clark
Jean-Yves Toullec
04/01/2015
Article
Anthropogenic impact on macrobenthic communities and consequences for shorebirds in Northern France : a complex response
Biological Conservation , 2015 , 184 , pp. 396-404
Céline Rolet
Nicolas Spilmont
Dominique Davoult
Eric Goberville
Christophe Luczak
04/01/2015
Article
Does natural selection explain the fine scale genetic structure at the nuclear exon Glu-5 ` in blue mussels from Kerguelen?
Ecology and Evolution , 2015 , 5 (7) , pp. 1456--1473
Karin Gérard
Charlotte Roby
Nicolas Bierne
Philippe Borsa
Jean-Pierre Feral
Anne Chenuil
04/01/2015
Article
Semi-rational approach for converting a GH36 α-glycosidase into an α-transglycosidase
Glycobiology , 2015 , 25 (4) , pp. 420 - 427
David Teze
Franck Daligault
Vincent Ferrières
Yves-Henri Sanejouand
Charles Tellier
04/01/2015
Article
Blue-Green Algae in a “Greenhouse Century”? New Insights from Field Data on Climate Change Impacts on Cyanobacteria Abundance
Ecosystems , 2015 , 18 (3) , pp. 441-458
Orlane Anneville
Isabelle Domaizon
Onur Kerimoglu
Frédéric Rimet
Stéphan Jacquet
03/17/2015
Article
Transcriptome analyses to investigate symbiotic relationships between marine protists
Frontiers in Microbiology , 2015 , 6 , pp. 98
Sergio Balzano
Erwan Corre
Johan Decelle
Roberto Sierra
Patrick Wincker
Corinne da Silva
Julie Poulain
Jan Pawlowski
Fabrice Not
03/01/2015
Article
Production of genetically and developmentally modified seaweeds: exploiting the potential of artificial selection techniques
Frontiers in Plant Science , 2015 , pp. 2015 Feb 19;6:68.
Stefan de Folter
Bénédicte Charrier
Elodie Rolland
Vishal Gupta
03/01/2015
Article
‘Ménage à trois’: a selfish genetic element uses a virus to propagate within Thermotogales
Applied and Environmental Microbiology , 2015 , 17 (9) , pp. 3278–3288
Julien Lossouarn
Camilla L. Nesbø
Coraline Mercier
Olga Zhaxybayeva
Milo S. Johnson
Rhianna Charchuck
Julien Farasin
Nadège Bienvenu
Anne-Claire Baudoux
Grégoire Michoud
et al.
03/01/2015
Article
Molecular characterization of peptide fractions of a Tilapia (Oreochromis niloticus) by-product hydrolysate and in vitro evaluation of antibacterial activity
Process Biochemistry , 2015 , 50 (3) , pp. 487-492
Marie Robert
Céline Zatylny-Gaudin
Vincent Fournier
Erwan Corre
Gildas Le Corguillé
Benoît Bernay
Joël Henry
02/24/2015
Article
Testing ecological theories with sequence similarity networks: marine ciliates exhibit similar geographic dispersal patterns as multicellular organisms
BMC Biology , 2015 , 13 (1) , pp. 16
Dominik Forster
Lucie Bittner
Slim Karkar
Micah Dunthorn
Sarah Romac
Stéphane Audic
Philippe Lopez
Thorsten Stoeck
Eric Bapteste
02/19/2015
Article
The green seaweed Ulva: a model system to study morphogenesis
Frontiers in Plant Science , 2015 , 6 , pp. 72
Thomas Wichard
Bénédicte Charrier
Frédéric Mineur
John H. Bothwell
Olivier De Clerck
Juliet C. Coates
02/19/2015
Article
Localization of causal locus in the genome of the brown macroalga Ectocarpus: NGS-based mapping and positional cloning approaches
Frontiers in Plant Science , 2015 , 6
Bernard Billoud
Émilie Jouanno
Zofia Nehr
Baptiste Carton
Élodie Rolland
Sabine Chenivesse
Bénédicte Charrier
02/17/2015
Article
Pigment signatures of phytoplankton communities in the Beaufort Sea
Biogeosciences , 2015 , 12 (4) , pp. 991-1006
Pierre Coupel
Atsushi Matsuoka
Diana Ruiz-Pino
M. Gosselin
Dominique Marie
Jean-Éric Tremblay
Marcel Babin
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