Archives Hal
01/12/2024
Article
A step in the deep evolution of Alvinellidae (Annelida: Polychaeta): A phylogenomic comparative approach based on transcriptomes
Molecular Phylogenetics and Evolution , 2024 , 201 , pp. 108207
Pierre-Guillaume Brun
Stephane Hourdez
Marion Ballenghien
Yadong Zhou
Jean Mary
Didier Jollivet
27/11/2024
Preprint, Working Paper
Phago-mixotrophy of small eukaryotic phytoplankton might alleviate iron limitation in HNLC Southern Ocean
Denise Rui Ying Ong
Andrés Gutiérrez-Rodríguez
Karl Safi
Dominique Marie
Karen Selph
Michael Stukel
Moira Décima
Adriana Lopes dos Santos
27/11/2024
Preprint, Working Paper
Selection can favor a recombination landscape that limits polygenic adaptation
Tom Parée
Luke Noble
Denis Roze
Henrique Teotónio
27/11/2024
Preprint, Working Paper
Gelatinous matrix, an original strategy to cope with oligotrophy in Nassellaria (Radiolaria)
Natalia Llopis Monferrer
Sarah Romac
Manon Laget
Yasuhide Nakamura
Tristan Biard
Miguel Sandin
25/11/2024
Article
How marine are Marine Stramenopiles (MAST)? A cross-system evaluation
FEMS Microbiology Ecology , 2024 , 100 (11) , pp. fiae130
Aleix Obiol
Javier del Campo
Colomban de Vargas
Frédéric Mahé
Ramon Massana
14/11/2024
Preprint, Working Paper
Marine bacterial enrichment in the sea surface microlayer, and surface taxa aerosolization potential in the Western Mediterranean Sea
Julie Dinasquet
Birthe Zäncker
Alessia Nicosia
Estelle Bigeard
Anne-Claire Baudoux
Anja Engel
Cecile Guieu
Ingrid Obernosterer
Karine Sellegri
31/10/2024
Article
Benthic foraminifera as bio-indicators of natural and anthropogenic conditions in Roscoff Aber Bay (Brittany, France)
PLoS ONE , 2024 , 19 (10) , pp. e0309463
Edwin Daché
Pierre-Antoine Dessandier
Ranju Radhakrishnan
Valentin Foulon
Loïc Michel
Colomban de Vargas
Jozée Sarrazin
Daniela Zeppilli
14/10/2024
Preprint, Working Paper
Chromosome-scale genome assembly and gene annotation of the hydrothermal vent annelid Alvinella pompejana yield insight into animal evolution in extreme environments
Sami El Hilali
Philippe Dru
Alan Le Moan
Yang Li
Martijn Huynen
André Hoelz
Robert Robinson
José Martín-Durán
Didier Jollivet
Adam Claridge-Chang
et al.
03/10/2024
Article
Light color regulation of photosynthetic antennae biogenesis in marine phytoplankton
Plant and Cell Physiology , 2024
David M. Kehoe
Avijit Biswas
Bo Chen
Louison Dufour
Théophile Grébert
Allissa M. Haney
Kes Lynn Joseph
Indika Kumarapperuma
Adam A. Nguyen
Morgane Ratin
et al.
01/10/2024
Article
Disentangling the effect of space, time, and environmental and anthropogenic drivers on coastal macrobenthic β diversity in contrasting habitats over 15 years
Science of the Total Environment , 2024 , 946 , pp. 173919
Chirine Toumi
Olivier Gauthier
Jacques Grall
Éric Thiébaut
Aurélien Boyé
27/09/2024
Article
“Pink power”—the importance of coralline algal beds in the oceanic carbon cycle
Nature Communications , 2024 , 15 (1) , pp. 8282
Nadine Schubert
Fernando Tuya
Viviana Peña
Paulo Horta
Vinícius Salazar
Pedro Neves
Cláudia Ribeiro
Francisco Otero-Ferrer
Fernando Espino
Kathryn Schoenrock
et al.
19/09/2024
Article
Positive species interactions structure rhodolith bed communities at a global scale
Biological Reviews , 2024 , 907 , pp. 167526
Fabio Bulleri
Nadine Schubert
Jason Hall-Spencer
Daniela Basso
Heidi Burdett
Ronaldo Francini-Filho
Jacques Grall
Paulo Horta
Nicholas Kamenos
Sophie Martin
et al.
18/09/2024
Article
Photophysiology of the haploid form of the cryptophyte Teleaulax amphioxeia
Journal of Phycology , 2024 , 60 (5) , pp. 1220-1236
Sarah Garric
Morgane Ratin
Benoit Gallet
Johan Decelle
Ian Probert
Francisco Rodriguez
Christophe Six
01/09/2024
Article
A hydrothermal plume on the Southwest Indian Ridge revealed by a multi-proxy approach: Impact on iron and manganese distributions (GEOTRACES GS02)
Marine Chemistry , 2024 , pp. 104401
Corentin Baudet
Eva Bucciarelli
Géraldine Sarthou
Cédric Boulart
Ewan Pelleter
Millie Goddard-Dwyer
Hannah Whitby
Rui Zhang
Ingrid Obernosterer
David Gonzalez-Santana
et al.
31/07/2024
Article
Life cycle strategies in free‐living unicellular eukaryotes: Diversity, evolution, and current molecular tools to unravel the private life of microorganisms
Journal of Eukaryotic Microbiology , 2024
Iris Rizos
Miguel Frada
Lucie Bittner
Fabrice Not
07/07/2024
Chapître d'ouvrage
Culturing Diatoms
Daniel Vaulot
Gust Bilcke
Peter Chaerle
Angela Falciatore
Priscillia Gourvil
Michael W. Lomas
Ian Probert
Wim Vyverman
01/07/2024
Article
Impaired photoacclimation in a kleptoplastidic dinoflagellate reveals physiological limits of early stages of endosymbiosis
Current Biology - CB , 2024 , 34 (14) , pp. 3064-3076.e5
Sarah Garric
Morgane Ratin
Dominique Marie
Valentin Foulon
Ian Probert
Francisco Rodriguez
Christophe Six
11/06/2024
Preprint, Working Paper
Long-term survey of intertidal rocky shore macrobenthic community metabolism and structure after primary succession
Aline Migné
François Bordeyne
D Davoult
13/05/2024
Article
Arctic phytoplankton microdiversity across the marginal ice zone: Subspecies vulnerability to sea-ice loss
Elementa: Science of the Anthropocene , 2024 , 12 (1)
Catherine Gérikas Ribeiro
Adriana Lopes dos Santos
Nicole Trefault
Dominique Marie
Connie Lovejoy
Daniel Vaulot
01/05/2024
Article
Highly structured populations of copepods at risk to deep‐sea mining: Integration of genomic data with demogenetic and biophysical modelling
Molecular Ecology , 2024 , 33 (9) , pp. e17340 (21p.)
Coral Diaz‐recio Lorenzo
Adrien Tran Lu Y
Otis Brunner
Pedro Martinez Arbizu
Didier Jollivet
Stefan Laurent
Sabine Gollner
04/04/2024
Article
French coastal network for carbonate system monitoring: the CocoriCO2 dataset
Earth System Science Data , 2024 , 16 (4) , pp. 1667-1688
Sébastien Petton
Fabrice Pernet
Valérian Le Roy
Matthias Huber
Sophie Martin
Éric Macé
Yann Bozec
Stéphane Loisel
Peggy Rimmelin-Maury
Émilie Grossteffan
et al.
01/04/2024
Article
Diverse pathways to speciation revealed by marine snails
Trends in Genetics , 2024 , 40 (4) , pp. 337-351
Kerstin Johannesson
Rui Faria
Alan Le Moan
Marina Rafajlović
Anja Marie Westram
Roger Butlin
Sean Stankowski
01/04/2024
Article
A single coelomic cell type is involved in both immune and respiratory functions of the coastal bioindicator annelid: Capitella C-Channel1 from the English Channel
Developmental and Comparative Immunology , 2024 , 153 , pp. 105132
Céline Boidin-Wichlacz
Ann Andersen
Nathalie Jouy
Aurélie Tasiemski
Stephane Hourdez
18/02/2024
Comm. dans un congrès
Marine picocyanobacteria, an important player in the distribution of dissolved methane in the Western Tropical South Pacific Ocean?
C. Boulart
Emile Faure
Laurence Garczarek
Pierre Le Moal
Emile Magadur
Charlotte Berthelier
Jean-Philippe Gac
Frédéric Partensky
Estelle Bigeard
Mathilde Ferrieux
et al.
16/02/2024
Article
Differential acclimation kinetics of the two forms of type IV chromatic acclimaters occurring in marine Synechococcus cyanobacteria
Frontiers in Microbiology , 2024 , 15 , pp. 1349322
Louison Dufour
Laurence Garczarek
Bastian Gouriou
Julia Clairet
Morgane Ratin
Frédéric Partensky
13/02/2024
Article
The global genetic diversity of planktonic foraminifera reveals the structure of cryptic speciation in plankton
Biological Reviews , 2024 , 99 (4) , pp. 1218–1241
Raphaël Morard
Kate Darling
Agnes Weiner
Christiane Hassenrück
Chiara Vanni
Tristan Cordier
Nicolas Henry
Mattia Greco
Nele Vollmar
Tamara Milivojevic
et al.
12/02/2024
Article
The evosystem: A centerpiece for evolutionary studies
BioEssays , 2024 , 46 (4)
François Papale
Fabrice Not
Éric Bapteste
Louis‐patrick Haraoui
16/01/2024
Article
On the influence of bed roughness on saltation in inertial regime
Earth Surface Processes and Landforms , 2024 , 49 (4) , pp. 1303-1315
Gaspard Minster
France Floc'H
Alexandre Valance
Nicolas Le Dantec
Amandine Nicolle
Benoit Zerr
01/01/2024
Article
From reproductive behaviour to responses to predators: Ocean acidification does not impact the behaviour of an herbivorous marine gastropod
Science of the Total Environment , 2024 , 907 , pp. 167526
Sabine Roussel
Manon Coheleach
Sophie Martin
Rob Day
Aicha Badou
Sylvain Huchette
Philippe Dubois
Arianna Servili
Fanny Gaillard
Stéphanie Auzoux-Bordenave
01/01/2024
Article
Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems
Cell , 2024
France Denoeud
Olivier Godfroy
Corinne Cruaud
Svenja Heesch
Zofia Nehr
Nachida Tadrent
Arnaud Couloux
Loraine Brillet-Guéguen
Ludovic Delage
Dean Mckeown
et al.
01/01/2024
Article
Multi-scale patterns in the structure of fish and fouling communities associated with seaweeds in marinas
Marine Ecology Progress Series , 2024 , 742 , pp. 1-19
Jean‐charles Leclerc
Maéva Gonzalez
Jean-Philippe Pezy
Aurore Raoux
Romain Crec'Hriou
Caroline Broudin
Céline Houbin
Aline Migné
Stéphane Loisel
Laure Sevin
et al.
01/01/2024
Article
A step towards measuring connectivity in the deep sea: elemental fingerprints of mollusk larval shells discriminate hydrothermal vent sites
Biogeosciences , 2024 , 21 (1) , pp. 145-160
Vincent Mouchi
Christophe Pécheyran
Fanny Claverie
Cécile Cathalot
Marjolaine Matabos
Yoan Germain
Olivier Rouxel
Didier Jollivet
Thomas Broquet
Thierry Comtet
01/01/2024
Article
Reproductive biology and population structure of three hydrothermal gastropods (Lepetodrilus schrolli, L. fijiensis and Shinkailepas tollmanni) from the South West Pacific back-arc basins
Marine Biology , 2024 , 171 (1) , pp. 31
Camille Poitrimol
Marjolaine Matabos
Alicia Veuillot
Annah Ramière
Thierry Comtet
Cedric Boulart
Cecile Cathalot
Éric Thiébaut
01/01/2024
Article
Physiological differences among cryptic species of the Mediterranean crustose coralline alga Lithophyllum stictiforme (Corallinales, Rhodophyta)
European Journal of Phycology , 2024 , (2024 - Issue 2) , pp. Pages 184-195
Sophie Martin
Virgile Calvert
Anne Chenuil
01/12/2023
Article
Endogenous viral elements reveal associations between a non-retroviral RNA virus and symbiotic dinoflagellate genomes
Communications Biology , 2023 , 6 (1) , pp. 566
Alex Veglia
Kalia Bistolas
Christian Voolstra
Benjamin Hume
Hans-Joachim Ruscheweyh
Serge Planes
Denis Allemand
Emilie Boissin
Patrick Wincker
Julie Poulain
et al.
01/12/2023
Article
Ocean-wide comparisons of mesopelagic planktonic community structures
ISME Communications , 2023 , 3 (1)
Janaina Rigonato
Marko Budinich
Alejandro Murillo
Manoela Brandão
Juan Pierella Karlusich
Yawouvi Dodji Soviadan
Ann Gregory
Hisashi Endo
Florian Kokoszka
Dean Vik
et al.
01/12/2023
Article
Top abundant deep ocean heterotrophic bacteria can be retrieved by cultivation
ISME Communications , 2023 , 3 (1)
Isabel Sanz-Sáez
Pablo Sánchez
Guillem Salazar
Shinichi Sunagawa
Colomban de Vargas
Chris Bowler
Matthew Sullivan
Patrick Wincker
Eric Karsenti
Carlos Pedrós-Alió
et al.
01/12/2023
Article
Host transcriptomic plasticity and photosymbiotic fidelity underpin $Pocillopora$ acclimatization across thermal regimes in the Pacific Ocean
Nature Communications , 2023 , 14 , pp. 3056
Eric J Armstrong
Julie Lê-Hoang
Quentin Carradec
Jean-Marc Aury
Benjamin Noel
Benjamin C C Hume
Christian R Voolstra
Julie Poulain
Caroline Belser
David A Paz-García
et al.
01/12/2023
Article
Ecology of Endozoicomonadaceae in three coral genera across the Pacific Ocean
Nature Communications , 2023 , 14 (1) , pp. 3037
Corentin Hochart
Lucas Paoli
Hans-Joachim Ruscheweyh
Guillem Salazar
Emilie Boissin
Sarah Romac
Julie Poulain
Guillaume Bourdin
Guillaume Iwankow
Clémentine Moulin
et al.
01/12/2023
Article
Differences in carbonate chemistry up-regulation of long-lived reef-building corals
Scientific Reports , 2023 , 13 (1) , pp. 11589
Marine Canesi
Eric Douville
Paolo Montagna
Marco Taviani
Jarosław Stolarski
Louise Bordier
Arnaud Dapoigny
Gninwoyo Eric Hermann Coulibaly
Anne-Catherine Simon
Mathieu Agelou
et al.
17/11/2023
Article
Global perspective of environmental distribution and diversity of Perkinsea (Alveolata) explored by a meta-analysis of eDNA surveys
Scientific Reports , 2023 , 13 (1) , pp. 20111
Sebastian Metz
Sarah Itoïz
Aleix Obiol
Evelyne Derelle
Ramon Massana
Cédric Berney
Colomban de Vargas
Philippe Soudant
Adam Monier
Aurélie Chambouvet
01/10/2023
Article
Long‐term population decline of a genetically homogeneous continental‐wide top Arctic predator
Ibis , 2023 , 165 (4) , pp. 1251-1266
Marianne Gousy-Leblanc
Jean‐françois Therrien
Thomas Broquet
Delphine Rioux
Nadine Curt-Grand-Gaudin
Nathalie Tissot
Sophie Tissot
Ildiko Szabo
Laurie Wilson
Jack Evans
et al.
14/09/2023
Comm. dans un congrès
Hibernation in brown bears: A model for medical and space research
Etienne Lefai
Cécile Coudy-Gandilhon
Fourneaux Guillaume
Chloé Richard
Pourpe Charlène
Geffroy Alexandre
Lydie Combaret
Fabrice Bertile
23/08/2023
Article
Beyond the limits of the unassigned protist microbiome: inferring large-scale spatio-temporal patterns of marine parasites
ISME Communications , 2023 , 3 (16)
Iris Rizos
Pavla Debeljak
Thomas Finet
Dylan Klein
Sakina-Dorothée Ayata
Fabrice Not
Lucie Bittner
19/08/2023
Article
Inter-comparison of marine microbiome sampling protocols
ISME Communications , 2023 , 3 (1) , pp. 84
Francisco Pascoal
Maria Paola Tomasino
Roberta Piredda
Grazia Marina Quero
Luís Torgo
Julie Poulain
Pierre E. Galand
Jed A Fuhrman
Alex Mitchell
Tinkara Tinta
et al.
13/07/2023
Article
Taxonomic surrogates for long-term macrobenthic community monitoring: an application with community trajectory analysis
Marine Ecology Progress Series , 2023 , 714 , pp. 105-111
C Toumi
Olivier Gauthier
É Thiébaut
C Guedes
J Grall
30/06/2023
Article
Eukaryotic algal community composition in tropical environments from solar salterns to the open sea
Frontiers in Marine Science , 2023 , 10
Charlotte Eckmann
Jessica Eberle
Fabian Wittmers
Susanne Wilken
Kristin Bergauer
Camille Poirier
Marguerite Blum
Kriste Makareviciute-Fichtner
Valeria Jimenez
Charles Bachy
et al.
27/06/2023
Article
Transcriptional Mechanisms of Thermal Acclimation in Prochlorococcus
mBio , 2023 , 14 (3)
Laura Alonso-Sáez
Antonio Palacio
Ana Cabello
Semidán Robaina-Estévez
José González
Laurence Garczarek
Ángel López-Urrutia
25/06/2023
Article
The diversification of the antimicrobial peptides from marine worms is driven by environmental conditions
Science of the Total Environment , 2023 , 879 , pp. 162875
Renato Bruno
Céline Boidin-Wichlacz
Oleg Melnyk
Daniela Zeppilli
Celine Landon
Frédéric Thomas
Marie-Anne Cambon-Bonavita
Mickaël Lafond
Kamel Mabrouk
François Massol
et al.
05/06/2023
Comm. dans un congrès
Functional trait-based approaches as a common framework for aquatic ecologists : Synthesis and recent results.
, 2023 , 66 (3) , pp. 965-994
Séverine Martini
Floriane Larras
Aurélien Boyé
Emile Faure
Nicole Aberle
Philippe Archambault
Lise Bacouillard
Beatrix E Beisner
Lucie Bittner
Emmanuel Castella
et al.
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