Archives Hal
01/05/2022
Article
Searching for genetic evidence of demographic decline in an arctic seabird: beware of overlapping generations
Heredity , 2022 , 128 (5) , pp. 364-376
Emeline Charbonnel
Claire Daguin-Thiébaut
Lucille Caradec
Eléonore Moittié
Olivier Gilg
Maria V. Gavrilo
Hallvard Strøm
Mark L. Mallory
R. I. Guy Morrison
H. Grant Gilchrist
et al.
19/04/2022
Article
Dispersal and habitat dynamics shape the genetic structure of the Northern chamois in the Alps
Journal of Biogeography , 2022 , 49 (10) , pp. 1848-1861
Flurin Leugger
Thomas Broquet
Dirk Nikolaus Karger
Delphine Rioux
Elena Buzan
Luca Corlatti
Barbara Crestanello
Nadine Curt-Grand-Gaudin
Heidi Christine Hauffe
Barbora Rolečková
et al.
01/04/2022
Article
Parasitic infections by Group II Syndiniales target selected dinoflagellate host populations within diverse protist assemblages in a model coastal pond
Environmental Microbiology , 2022 , 24 (4) , pp. 1818-1834
Taylor Sehein
Rebecca Gast
Maria Pachiadaki
Laure Guillou
Virginia Edgcomb
01/04/2022
Article
Linking Micropollutants to Trait Syndromes across Freshwater Diatom, Macroinvertebrate, and Fish Assemblages
Water , 2022 , 14 (8) , pp. 1184
Albin Meyer
Benjamin Alric
Olivier Dézerald
Elise Billoir
Romain Coulaud
Floriane Larras
Cédric P Mondy
Philippe Usseglio-Polatera
01/04/2022
Article
Freshwater protists: unveiling the unexplored in a large floodplain system
Environmental Microbiology , 2022 , 24 (4) , pp. 1731-1745
Sebastian Metz
Paula Huber
Victoria Accattatis
Adriana Lopes dos Santos
Estelle Bigeard
Fernando Unrein
Aurélie Chambouvet
Fabrice Not
Enrique Lara
Melina Devercelli
01/04/2022
Article
Diversity and Evolution of Pigment Types in Marine Synechococcus Cyanobacteria
Genome Biology and Evolution , 2022 , 14 (4)
Théophile Grébert
Laurence Garczarek
Vincent Daubin
Florian Humily
Dominique Marie
Morgane Ratin
Alban Devailly
Gregory Farrant
Isabelle Mary
Daniella Mella-Flores
et al.
17/03/2022
Article
Active hydrothermal vents in the Woodlark Basin may act as dispersing centres for hydrothermal fauna,Les systèmes hydrothermaux actifs du bassin de Woodlark peuvent jouer le rôle de centres de dispersion pour la faune hydrothermale
Communications Earth & Environment , 2022 , 3 , pp. 64
Cédric Boulart
Olivier Rouxel
Carla Scalabrin
Pierre Le Meur
Ewan Pelleter
Camille Poitrimol
Eric Thiébaut
Marjolaine Matabos
Jade Castel
Adrien Tran Lu y
et al.
28/02/2022
Chapître d'ouvrage
Marine cyanobacteria
, 2022 , 3 , pp. 103-157
Frédéric Partensky
Wolfgang Hess
Laurence Garczarek
16/02/2022
Article
Enhanced scanning electron microscopy images using muscovite mica, an example with Rhizaria
Microscopy Research and Technique , 2022
Natalia Llopis Monferrer
Valentin Foulon
Philippe Elies
07/02/2022
Article
Temperature Affects the Biological Control of Dinoflagellates by the Generalist Parasitoid Parvilucifera rostrata
Microorganisms , 2022 , 10 (2) , pp. 385
Matthew Schmitt
Aaron Telusma
Estelle Bigeard
Laure Guillou
Catharina Alves-De-Souza
04/02/2022
Article
Patterns of eukaryotic diversity from the surface to the deep-ocean sediment
Science Advances , 2022 , 8 (5)
Tristan Cordier
Inès Barrenechea Angeles
Nicolas Henry
Franck Lejzerowicz
Cédric Berney
Raphaël Morard
Angelika Brandt
Marie-Anne Cambon-Bonavita
Lionel Guidi
Fabien Lombard
et al.
02/02/2022
Article
Spatio-temporal patterns in stable isotope composition of a benthic intertidal food web reveal limited influence from salt marsh vegetation and green tide
Marine Environmental Research , 2022 , 175 , pp. 105572
A Sturbois
P Riera
N Desroy
T Brébant
A Carpentier
A Ponsero
G Schaal
01/02/2022
Article
Molecular Features Associated with Resilience to Ocean Acidification in the Northern Quahog, Mercenaria mercenaria
Marine Biotechnology , 2022 , 806 , pp. 149925
Caroline Schwaner
Sarah Farhat
Michelle Barbosa
Isabelle Boutet
Arnaud Tanguy
Emmanuelle Pales Espinosa
Bassem Allam
05/01/2022
Article
Alien vs. predator: influence of environmental variability and predation on the survival of ascidian recruits of a native and alien species
Biological Invasions , 2022 , 24 , pp. 1327-1344
Robin P M Gauff
Christophe Lejeusne
Laure Arsenieff
Olivier Bohner
Jérôme Coudret
Florian Desbordes
Alise Jandard
Stéphane Loisel
Gaëtan Schires
Emmanuel Wafo
et al.
01/01/2022
Article
Multiple photolyases protect the marine cyanobacterium Synechococcus from ultraviolet radiation
mBio , 2022 , 13 (4) , pp. 01511-22
Allissa Haney
Joseph Sanfilippo
Laurence Garczarek
Frédéric Partensky
David Kehoe
01/01/2022
Article
Inter-Specific Genetic Exchange Despite Strong Divergence in Deep-Sea Hydrothermal Vent Gastropods of the Genus Alviniconcha
Genes , 2022 , 13 (6) , pp. 985
Jade Castel
Stéphane Hourdez
Florence Pradillon
Claire Daguin-Thiébaut
Marion Ballenghien
Stéphanie Ruault
Erwan Corre
Adrien Tran Lu Y
Jean Mary
Pierre-Alexandre Gagnaire
et al.
01/01/2022
Article
Genomic patterns of divergence in the early and late steps of speciation of the deep-sea vent thermophilic worms of the genus Alvinella
BMC Ecology and Evolution , 2022 , 22 , pp. 106
Camille Thomas-Bulle
Denis Bertrand
Niranjan Nagarajan
Richard R Copley
Erwan Corre
Stephane Hourdez
Éric Bonnivard
Adam Claridge-Chang
Didier Jollivet
01/01/2022
Article
Viability, efficiency, resilience and equity: using very diverse indicators to deal with uncertainties of future events
Environmental Science & Policy , 2022 , 138 , pp. 56-75
Sophie Martin
Katrin Erdlenbruch
Isabelle Alvarez
Sylvie Huet
Charline Smadi
01/01/2022
Article
The phycoerythrobilin isomerization activity of MpeV in Synechococcus sp. WH8020 is prevented by the presence of a histidine at position 141 within its phycoerythrin-I β-subunit substrate
Frontiers in Microbiology , 2022 , 13 , pp. 1011189
Lyndsay A Carrigee
Jacob P Frick
Xindi Liu
Jonathan A Karty
Jonathan C Trinidad
Irin P Tom
Xiaojing Yang
Louison Dufour
Frédéric Partensky
Wendy M. Schluchter
01/01/2022
Article
Balanced Polymorphism at the Pgm-1 Locus of the Pompeii Worm Alvinella pompejana and Its Variant Adaptability Is Only Governed by Two QE Mutations at Linked Sites
Genes , 2022 , 13 (2) , pp. 206
Alexis Bioy
Anne-Sophie Le Port
Emeline Sabourin
Marie Verheye
Patrice Piccino
Baptiste Faure
Stephane Hourdez
Jean Mary
Didier Jollivet
01/01/2022
Article
N2 fixation in the Mediterranean Sea related to the composition of the diazotrophic community, and impact of dust under present and future environmental conditions.
Biogeosciences , 2022 , 19 (2) , pp. 415-435
Céline Ridame
Julie Dinasquet
Søren Hallstrøm
Estelle Bigeard
Lasse Riemann
France van Wambeke
Matthieu Bressac
Elvira Pulido-Villena
Vincent Taillandier
Fréderic Gazeau
et al.
01/01/2022
Article
Comparative Thermophysiology of Marine Synechococcus CRD1 Strains Isolated From Different Thermal Niches in Iron-Depleted Areas
Frontiers in Microbiology , 2022 , 13 , pp. 893413
Mathilde Ferrieux
Louison Dufour
Hugo Doré
Morgane Ratin
Audrey Guéneuguès
Léo Chasselin
Dominique Marie
Fabienne Rigaut-Jalabert
Florence Le Gall
Théo Sciandra
et al.
01/01/2022
Article
Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems
eLife , 2022
Daniel J Richter
Romain Watteaux
Thomas Vannier
Jade Leconte
Paul Frémont
Gabriel Reygondeau
Nicolas Maillet
Nicolas Henry
Gaëtan Benoit
Antonio Fernandez-Guerra
et al.
01/01/2022
Article
The relative contribution of fleshy epiphytic macroalgae to the production of temperate maerl (rhodolith) beds
Marine Ecology Progress Series , 2022 , 693 , pp. 69-82
Zn Qui-Minet
Dominique Davoult
Jacques Grall
Sophie Martin
01/01/2022
Article
Pollution gradient leads to local adaptation and small-scale spatial variability of communities and functions in an urban marine environment
Science of the Total Environment , 2022 , 838 (1) , pp. 155911
Robin P.M. Gauff
Dominique Davoult
Stephane Greff
Olivier Bohner
Jérôme Coudret
Stéphanie Jacquet
Stéphane Loisel
Simon Rondeau
Laure Sevin
Emmanuel Wafo
et al.
01/01/2022
Article
Water eDNA metabarcoding is effective in detecting non-native species in marinas, but detection errors still hinder its use for passive monitoring
Biofouling , 2022
Marjorie Couton
Laurent Lévêque
Claire Daguin-Thiébaut
Thierry Comtet
Frédérique Viard
01/01/2022
Article
EukProt: A database of genome-scale predicted proteins across the diversity of eukaryotes
Peer Community Journal , 2022 , 2 , pp. e56
Daniel Richter
Cédric Berney
Jürgen Strassert
Yu-Ping Poh
Emily Herman
Sergio Muñoz-Gómez
Jeremy Wideman
Fabien Burki
Colomban de Vargas
01/01/2022
Article
Crystal structure and molecular mechanism of an E/F type bilin lyase-isomerase
Structure , 2022 , 30 (4) , pp. 564-574.E3
Indika Kumarapperuma
Kes Lynn Joseph
Cong Wang
Linta Biju
Irin Tom
Kourtney Weaver
Théophile Grébert
Frédéric Partensky
Wendy Schluchter
Xiaojing Yang
01/01/2022
Article
Coping with poachers in European stalked barnacle fisheries
Marine Policy , 2022 , 135 , pp. 104826
Katja Geiger
Antonella Rivera
Alba Aguión
Jorge Álvarez
Julio Arrontes
yaisel Juan Borrell
Teresa Cruz
Dominique Davoult
Jesús Dubert
Marieke Feis
et al.
01/01/2022
Article
Swarm v3: towards tera-scale amplicon clustering
Bioinformatics , 2022 , 38 (1) , pp. 267-269
Frédéric Mahé
Lucas Czech
Alexandros Stamatakis
Christopher Quince
Colomban de Vargas
Micah Dunthorn
Torbjørn Rognes
01/01/2022
Article
Carbon and nitrogen uptake through photosynthesis and feeding by photosymbiotic Acantharia
Open Research Europe , 2022 , 2 , pp. 120
Joost Samir Mansour
Per Juel Hansen
Cédrix Leroux
Fabrice Not
01/01/2022
Article
metaPR 2 : A database of eukaryotic 18S rRNA metabarcodes with an emphasis on protists
Molecular Ecology Resources , 2022
Daniel Vaulot
Clarence Wei Hung Sim
Denise Ong
Bryan Teo
Charlie Biwer
Mahwash Jamy
Adriana Lopes dos Santos
01/01/2022
Article
Combined effects of ocean warming and acidification on the larval stages of the European abalone Haliotis tuberculata
Marine Pollution Bulletin , 2022 , 175 , pp. 113131
Javid Kavousi
Sabine Roussel
Sophie Martin
Fanny Gaillard
Aicha Badou
Carole Di Poi
Sylvain Huchette
Philippe Dubois
Stéphanie Auzoux-Bordenave
01/01/2022
Article
Subtle limits to connectivity revealed by outlier loci within two divergent metapopulations of the deep-sea hydrothermal gastropod Ifremeria nautilei
Molecular Ecology , 2022 , 31 (10) , pp. 2796-2813
Adrien Tran Y. Lu
Stephanie Ruault
Claire Daguin-Thiébaut
Jade Castel
Nicolas Bierne
Thomas Broquet
Patrick Wincker
Aude Perdereau
Sophie Arnaud-Haond
Pierre-Alexandre Gagnaire
et al.
01/01/2022
Article
Introgression between highly divergent sea squirt genomes: an adaptive breakthrough?
Peer Community Journal , 2022 , 2 , pp. e54
Christelle Fraïsse
Alan Le Moan
Camille Roux
Guillaume Dubois
Claire Daguin-Thiébaut
Pierre-Alexandre Gagnaire
Frédérique Viard
Nicolas Bierne
01/01/2022
Chapître d'ouvrage
Phytoplankton diversity and ecology through the lens of high throughput sequencing technologies
, 2022 , pp. 353-413
Adriana Lopes dos Santos
Catherine Gérikas Ribeiro
Denise Ong
Laurence Garczarek
Xiao Li Shi
Scott Nodder
Daniel Vaulot
Andres Gutiérrez-Rodríguez
09/12/2021
Article
Low Transcriptomic Plasticity of Antarctic Giant Isopod Glyptonotus antarcticus Juveniles Exposed to Acute Thermal Stress
Frontiers in Marine Science , 2021 , 8
Marcelo González-Aravena
Rodolfo Rondon
Alejandro Font
César A Cárdenas
Jean-yves Toullec
Erwan Corre
Kurt Paschke
01/12/2021
Article
Annual phytoplankton dynamics in coastal waters from Fildes Bay, Western Antarctic Peninsula
Scientific Reports , 2021 , 11 (1) , pp. 1368
Nicole Trefault
Rodrigo de La Iglesia
Mario Moreno-Pino
Adriana Lopes dos Santos
Catherine Gérikas Ribeiro
Génesis Parada-Pozo
Antonia Cristi
Dominique Marie
Daniel Vaulot
01/12/2021
Article
Macroscale patterns of oceanic zooplankton composition and size structure
Scientific Reports , 2021 , 11 (1)
Manoela Brandão
Fabio Benedetti
Séverine Martini
Yawouvi Dodji Soviadan
Jean-Olivier Irisson
Jean-Baptiste Romagnan
Amanda Elineau
Corinne Desnos
Laëtitia Jalabert
Andrea Freire
et al.
01/12/2021
Article
High and specific diversity of protists in the deep-sea basins dominated by diplonemids, kinetoplastids, ciliates and foraminiferans
Communications Biology , 2021 , 4 (1) , pp. 501
Alexandra Schoenle
Manon Hohlfeld
Karoline Hermanns
Frédéric Mahé
Colomban de Vargas
Frank Nitsche
Hartmut Arndt
01/12/2021
Article
Rapid protein evolution, organellar reductions, and invasive intronic elements in the marine aerobic parasite dinoflagellate Amoebophrya spp
BMC Biology , 2021 , 19 (1)
Sarah Farhat
Phuong Le
Ehsan Kayal
Benjamin Noel
Estelle Bigeard
Erwan Corre
Florian Maumus
Isabelle Florent
Adriana A. Alberti
Jean-Marc Aury
et al.
29/11/2021
Preprint, Working Paper
Seasonal temporal dynamics of marine protists communities in tidally mixed coastal waters
Mariarita Caracciolo
Fabienne Rigaut-Jalabert
Sarah Romac
Frédéric Mahé
Samuel Forsans
Jean-Philippe Gac
Laure Arsenieff
Maxime Manno
Samuel Chaffron
Thierry Cariou
et al.
19/11/2021
Preprint, Working Paper
Rocky tidal pools: carbonate chemistry, diurnal variability and calcifying organisms in future high-CO2 conditions
Narimane Dorey
Sophie Martin
Lester Kwiatkowski
15/11/2021
Article
Compendium of 530 metagenome-assembled bacterial and archaeal genomes from the polar Arctic Ocean
Nature Microbiology , 2021 , 6 (12) , pp. 1561-1574
Marta Royo-Llonch
Pablo Sánchez
Clara Ruiz-González
Guillem Salazar
Carlos Pedrós-Alió
Marta Sebastián
Karine Labadie
Lucas Paoli
Federico M. Ibarbalz
Lucie Zinger
et al.
09/11/2021
Autre document
Prokaryotes/Eukaryotes 16S-V4V5 rRNA Metabarcoding PCR protocol for NGS Illumina sequencing V.2
Sarah Romac
08/11/2021
Article
Humoral response to a third injection of BNT162b2 vaccine in patients on maintenance haemodialysis
Clinical Kidney Journal , 2021 , 14 (11) , pp. 2349-2355
Marine Dekervel
Nicolas Henry
Massimo Torreggiani
Lise-Marie Pouteau
Jean-Paul Imiela
Chloé Mellaza
Anne-Sophie Garnier
Amaury Dujardin
Marine Asfar
Alexandra Ducancelle
et al.
01/11/2021
Article
Bioluminescence and Photoreception in Unicellular Organisms: Light-Signalling in a Bio-Communication Perspective
International Journal of Molecular Sciences , 2021 , 22 (21) , pp. 11311
Youri Timsit
Magali Lescot
Martha Valiadi
Fabrice Not
01/11/2021
Article
Greater functional similarity in mobile compared to sessile assemblages colonizing artificial coastal habitats
Marine Pollution Bulletin , 2021 , 172 , pp. 112844
Naily Nashira Figueroa
Antonio Brante
Frédérique Viard
Jean-Charles Leclerc
01/11/2021
Comm. dans un congrès
Reconstitution de provenance de coquilles d'huîtres archéologiques à partir de l'étude de la composition chimique élémentaire et isotopique
Marie Pesnin
Vincent Mouchi
Vianney Forest
Catherine Dupont
Laurent Emmanuel
29/10/2021
Article
Comparative genomic and transcriptomic analyses of transposable elements in polychaetous annelids highlight LTR retrotransposon diversity and evolution
Mobile DNA , 2021 , 12 (1) , pp. 24
Jonathan Filée
Sarah Farhat
Dominique Higuet
Laure Teysset
Dominique Marie
Camille Thomas-Bulle
Stephane Hourdez
Didier Jollivet
Eric Bonnivard
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