Archives Hal
01/07/2015
Article
The hydrological context determines the beta-diversity of aerobic anoxygenic phototrophic bacteria in European Arctic seas but does not favor endemism
Frontiers in Microbiology , 2015 , 6 , pp. 638
Anne-Catherine Lehours
Christian Jeanthon
01/07/2015
Article
Environmental Monitoring: Inferring the Diatom Index from Next-Generation Sequencing Data
Environmental Science and Technology , 2015 , 49 (13) , pp. 7597–7605
Joana Amorim Visco
Laure Apothéloz-Perret-Gentil
Arielle Cordonier
Philippe Esling
Loïc Pillet
Jan Pawlowski
01/07/2015
Poster
Convergence/conservation of immune processes involved in the establishment of ectosymbiosis between coastal and hydrothermal annelids inhabiting extreme environment
L. Roisin
C. Papot
C. Boidin-Wichlacz
D. Jollivet
L. Lesven
V. Cuvillier-Hot
J. Mary,
S. Duperron
S. Hourdez
A. Tasiemski
15/06/2015
Article
Comparative analysis of symbiont ratios and gene expression in natural populations of two Bathymodiolus mussel species
Symbiosis , 2015 , 63 (1) , pp. 19-29
H. Guezi
Isabelle Boutet
Ann C. Andersen
F. Lallier
Arnaud Tanguy
01/06/2015
Article
Significance of Plankton Community Structure and Nutrient Availability for the Control of Dinoflagellate Blooms by Parasites: A Modeling Approach
PLoS ONE , 2015 , 10 (6) , pp. e0127623
Catharina Alves-De-Souza
David Pecqueur
Emilie Le Floc'H
Sébastien Mas
Cécile Roques
Behzad Mostajir
Franscesca Vidussi
Lourdes Velo-Suárez
Marc Sourisseau
Eric Fouilland
et al.
25/05/2015
Article
The Observatory on LAkes (OLA) database: Sixty years of environmental data accessible to the public
Annales de Limnologie - International Journal of Limnology , 2015
Frédéric Rimet
Orlane Anneville
Denis Barbet
Cécile Chardon
Laura Crepin
Isabelle Domaizon
Jean-Marcel Dorioz
Laurent Espinat
Victor Frossard
Jean Guillard
et al.
21/05/2015
Article
Environmental characteristics of Agulhas rings affect interocean plankton transport
Science , 2015 , 348 (6237) , pp. 1261447 - 1261447
Emilie Villar
Gregory Farrant
Michael Follows
Laurence Garczarek
Sabrina Speich
Stéphane Audic
Lucie Bittner
Bruno Blanke
Jennifer R. Brum
Christophe Brunet
et al.
21/05/2015
Article
Patterns and ecological drivers of ocean viral communities
Science , 2015 , 348 (6237) , pp. 1261498
Jennifer Brum
J Cesar Ignacio-Espinoza
Simon Roux
Guilhem Doulcier
Silvia G. Acinas
Adriana A. Alberti
Samuel Chaffron
Corinne Cruaud
Colomban de Vargas
Josep Gasol
et al.
01/05/2015
Article
Metabolic responses to temperature stress under elevated pCO2 in Crepidula fornicata
Journal of Molluscan Studies , 2015 , 81 (2) , pp. 238-246
Fanny Noisette
Joelle Richard
Ines Le Fur
Lloyd S. Peck
Dominique Davoult
Sophie Martin
01/05/2015
Article
Photosynthetic activity and productivity of intertidal macroalgae: in situ measurements, from thallus to community scale
Aquatic Botany , 2015 , 123 , pp. 6-12
Aline Migné
Gaspard Delebecq
Dominique Davoult
Nicolas Spilmont
Dominique Menu
François Gévaert
01/05/2015
Article
Photosynthetic activity and productivity of intertidal macroalgae: in situ measurements, from thallus to community scale
Aquatic Botany , 2015 , 123 , pp. 6-12
Aline Migné
Gaspard Delebecq
Dominique Davoult
Nicolas Spilmont
Dominique Menu
François Gévaert
01/05/2015
Article
Paralytic shellfish toxin content is related to genomic sxtA4 copy number in Alexandrium minutum strains
Frontiers in Microbiology , 2015 , 6 , pp. 404
Anke Stüken
Pilar Riobó
José Franco
Kjetill S. Jakobsen
Laure Guillou
Rosa I. Figueroa
01/05/2015
Article
Structure and function of the global ocean microbiome
Science , 2015 , 348 (6237) , pp. 1261359
Shinichi Sunagawa
Luis Pedro Coelho
Samuel Chaffron
Jens Roat Kultima
Karine Labadie
Guillem Salazar
Bardya Djahanschiri
Georg Zeller
Daniel R. Mende
Adriana A. Alberti
et al.
01/05/2015
Article
Phaeocystis rex sp nov (Phaeocystales, Prymnesiophyceae): a new solitary species that produces a multilayered scale cell covering
European Journal of Phycology , 2015 , 50 (2) , pp. 207-222
Robert A. Andersen
J. Craig Bailey
Johan Decelle
Ian Probert
01/05/2015
Article
Expansion of the `Reticulosphere': Diversity of Novel Branching and Network-forming Amoebae Helps to Define Variosea (Amoebozoa)
Protist , 2015 , 166 (2) , pp. 271-295
Cédric Berney
Stefan Geisen
Jeroen van Wichelen
Frank Nitsche
Pieter Vanormelingen
Michael Bonkowski
David Bass
01/05/2015
Article
Tara Oceans studies plankton at PLANETARY SCALE
Science , 2015 , 348 (6237) , pp. 873
P. Bork
C. Bowler
Colomban de Vargas
G. Gorsky
E. Karsenti
P. Wincker
17/04/2015
Article
Investigating isotopic functional indices to reveal changes in the structure and functioning of benthic communities
Functional Ecology , 2015 , 29 (10) , pp. 1350–1360
Carinne Rigolet
Éric Thiébaut
Anik Brind 'Amour
Stanislas F. Dubois
02/04/2015
Article
Diversification, Evolution and Sub-Functionalization of 70kDa Heat-Shock Proteins in Two Sister Species of Antarctic Krill: Differences in Thermal Habitats, Responses and Implications under Climate Change
PLoS ONE , 2015 , 10 (4) , pp. e0121642
Kévin Cascella
Didier Jollivet
Claire Papot
Nelly Léger
Erwan Corre
Juliette Ravaux
Melody S. Clark
Jean-Yves Toullec
01/04/2015
Article
Anthropogenic impact on macrobenthic communities and consequences for shorebirds in Northern France : a complex response
Biological Conservation , 2015 , 184 , pp. 396-404
Céline Rolet
Nicolas Spilmont
Dominique Davoult
Eric Goberville
Christophe Luczak
01/04/2015
Article
Does natural selection explain the fine scale genetic structure at the nuclear exon Glu-5 ` in blue mussels from Kerguelen?
Ecology and Evolution , 2015 , 5 (7) , pp. 1456--1473
Karin Gérard
Charlotte Roby
Nicolas Bierne
Philippe Borsa
Jean-Pierre Feral
Anne Chenuil
01/04/2015
Article
Blue-Green Algae in a “Greenhouse Century”? New Insights from Field Data on Climate Change Impacts on Cyanobacteria Abundance
Ecosystems , 2015 , 18 (3) , pp. 441-458
Orlane Anneville
Isabelle Domaizon
Onur Kerimoglu
Frédéric Rimet
Stéphan Jacquet
17/03/2015
Article
Transcriptome analyses to investigate symbiotic relationships between marine protists
Frontiers in Microbiology , 2015 , 6 , pp. 98
Sergio Balzano
Erwan Corre
Johan Decelle
Roberto Sierra
Patrick Wincker
Corinne da Silva
Julie Poulain
Jan Pawlowski
Fabrice Not
01/03/2015
Article
‘Ménage à trois’: a selfish genetic element uses a virus to propagate within Thermotogales
Applied and Environmental Microbiology , 2015 , 17 (9) , pp. 3278–3288
Julien Lossouarn
Camilla L. Nesbø
Coraline Mercier
Olga Zhaxybayeva
Milo S. Johnson
Rhianna Charchuck
Julien Farasin
Nadège Bienvenu
Anne-Claire Baudoux
Grégoire Michoud
et al.
24/02/2015
Article
Testing ecological theories with sequence similarity networks: marine ciliates exhibit similar geographic dispersal patterns as multicellular organisms
BMC Biology , 2015 , 13 (1) , pp. 16
Dominik Forster
Lucie Bittner
Slim Karkar
Micah Dunthorn
Sarah Romac
Stéphane Audic
Philippe Lopez
Thorsten Stoeck
Eric Bapteste
17/02/2015
Article
Pigment signatures of phytoplankton communities in the Beaufort Sea
Biogeosciences , 2015 , 12 (4) , pp. 991-1006
Pierre Coupel
Atsushi Matsuoka
Diana Ruiz-Pino
M. Gosselin
Dominique Marie
Jean-Éric Tremblay
Marcel Babin
01/02/2015
Article
Seasonal variations of the composition of microbial biofilms in sandy tidal flats: Focus of fatty acids, pigments and exopolymers
Estuarine, Coastal and Shelf Science , 2015 , 153 , pp. 29-37
Claire Passarelli
Tarik Meziane
Najet Thiney
Dominique Boeuf
Bruno Jesus
Mickael Ruivo
Christian Jeanthon
Cédric Hubas
01/02/2015
Article
Species are hypotheses: avoid connectivity assessments based on pillars of sand
Molecular Ecology , 2015 , 24 (3) , pp. 525-544
Eric Pante
Nicolas Puillandre
Amélia Viricel
Sophie Arnaud-Haond
D. Aurelle
Magalie Castelin
Anne Chenuil
Christophe Destombe
Didier Forcioli
Myriam Valero
et al.
05/01/2015
Article
Community, trophic structure and functioning in two contrasting Laminaria hyperborea forests
Estuarine, Coastal and Shelf Science , 2015 , 152 , pp. 11-22
Jean-Charles Leclerc
Pascal Riera
Martial Laurans
Cédric Leroux
Laurent Lévêque
Dominique Davoult
01/01/2015
Article
Ocean acidification reshapes the otolith-body allometry of growth in juvenile seabream
Journal of Experimental Marine Biology and Ecology , 2015 , 463 , pp. 87–94
Elodie Réveillac
Thomas Lacoue-Labarthe
François Oberhänsli
Jean-Louis Teyssié
Ross Jeffree
Jean-Pierre Gattuso
Sophie Martin
01/01/2015
Article
The EChO science case
Experimental Astronomy , 2015 , pp. Experimental Astronomy, Online First 11/2015
Giovanna Tinetti
Pierre Drossart
Paul Eccleston
Paul Hartogh
Kate Isaak
Martin, Linder
Christophe, Lovis
Giusi, Micela
Marc, Ollivier
Ludovic, Puig
et al.
01/01/2015
Article
PhytoREF: a reference database of the plastidial 16S rRNA gene of photosynthetic eukaryotes with curated taxonomy
Molecular Ecology Resources , 2015 , 15 (6) , pp. 1435–1445
Johan Decelle
Sarah Romac
Rowena F Stern
El Mahdi Bendif
Adriana Zingone
Stéphane Audic
Michel D Guiry
Laure Guillou
Désiré Tessier
Florence Le Gall
et al.
01/01/2015
Article
PFR²: a curated database of planktonic Foraminifera18S ribosomal DNA as a resource for studies of plankton ecology, biogeography, and evolution
Molecular Ecology Resources , 2015 , 15 (6) , pp. 1472–1485
Raphaël Morard
Kate F Darling
Frédéric Mahé
Stéphane Audic
Yurika Ujiié
Agnes K.F. Weiner
Aurore André
Heidi Seears
Chris M Wade
Frédéric Quillévéré
et al.
01/01/2015
Chapître d'ouvrage
Invertébrés marins introduits dans le golfe normano-breton depuis 1920
Laurent Godet
Patrick Le Mao
Éric Thiébaut
Christian Retière
Louis Cabioch
Franck Gentil
Nicolas Desroy
Jérôme Fournier
01/01/2015
Article
The ocean sampling day consortium
GigaScience , 2015 , 4 (1) , pp. 27
Anna Kopf
Mesude Bicak
Renzo Kottmann
Julia Schnetzer
Ivaylo Kostadinov
Katja Lehmann
Antonio Fernandez-Guerra
Christian Jeanthon
Eyal Rahav
Matthias Ullrich
et al.
01/01/2015
Comm. dans un congrès
Revealing and analyzing networks of marine microbial ecosystems
Damien Eveillard
Lionel Guidi
Lucie Bittner
Samuel Chaffron
Jeroen Raes
Eric Karsenti
Chris Bowler
Gaby Gorsky
01/01/2015
Article
WiseScaffolder: an algorithm for the semi-automatic scaffolding of Next Generation Sequencing data
BMC Bioinformatics , 2015 , 16 , pp. 281
Gregory K. Farrant
Mark Hoebeke
Frédéric Partensky
Gwendoline Andres
Erwan Corre
Laurence Garczarek
01/01/2015
Article
Interplay between the genetic clades of Micromonas and their viruses in the Western English Channel
Environmental Microbiology Reports , 2015 , 7 (5) , pp. 765–773
Anne-Claire Baudoux
H Lebredonchel
H Dehmer
M Latimier
R Edern
Fabienne Rigaut-Jalabert
P Ge
Laure Guillou
Elodie Foulon
Yves Bozec
et al.
01/01/2015
Article
Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing
Environmental Microbiology , 2015 , 17 (10) , pp. 4035–4049
Ramon Massana
Angélique Gobet
Stéphane Audic
David Bass
Lucie Bittner
Christophe Boutte
Aurélie Chambouvet
Richard Christen
Jean-Michel Claverie
Johan Decelle
et al.
01/01/2015
Article
Unravelling the impact of harvesting pressure on canopy-forming macroalgae
Marine and Freshwater Research , 2015 , 67 (1) , pp. 153-161
Doriane Stagnol
Renaud Michel
Dominique Davoult
01/01/2015
Article
Metabolic activity of intertidal Fucus spp. communities: evidence for high aerial carbon fluxes displaying seasonal variability
Marine Biology , 2015 , 162 (10) , pp. 2119-2129
François Bordeyne
Aline Migné
Dominique Davoult
01/01/2015
Article
Repeated rapid assessment surveys reveal contrasting trends in occupancy of marinas by non-indigenous species on opposite sides of the western English Channel
Marine Pollution Bulletin , 2015 , 95 (2) , pp. 699-706
John D. D. Bishop
Christine A. Wood
Laurent Lévêque
Anna L. E. Yunnie
Frédérique Viard
01/01/2015
Article
How are microbial and detrital sources partitioned among and within gastropods species at East Pacific Rise hydrothermal vents?
Marine Ecology , 2015 , 36 (1, SI) , pp. 18-34
Sylvie M. Gaudron
Lise Marqué
Éric Thiébaut
Pascal Riera
Sébastien Duperron
Magali Zbinden
01/01/2015
Article
Role of pockmarks in diversity and species assemblages of coastal macrobenthic communities
Marine Ecology Progress Series , 2015 , 529 , pp. 91-105
Stanislas F. Dubois
Francois Derian
Xavier Caisey
Carinne Rigolet
Jean-Claude Caprais
Éric Thiébaut
01/01/2015
Article
Marine invasion genetics: from spatio-temporal patterns to evolutionary outcomes
Biological Invasions , 2015 , 17 (3, SI) , pp. 869-885
Marc Rius
Xavier Turon
Giacomo Bernardi
Filip A. M. Volckaert
Frédérique Viard
01/01/2015
Article
Genetic and phenotypic changes in an Atlantic salmon population supplemented with non-local individuals: a longitudinal study over 21 years
Proceedings of the Royal Society B: Biological Sciences , 2015 , 282 (1802) , pp. 20142765
Sabrina Le Cam
Charles Perrier
Anne-Laure Besnard
Louis Bernatchez
Guillaume Evanno
01/01/2015
Article
DNA (meta)barcoding of biological invasions: a powerful tool to elucidate invasion processes and help managing aliens
Biological Invasions , 2015 , 17 (3, SI) , pp. 905-922
Thierry Comtet
Anna Sandionigi
Frédérique Viard
Maurizio Casiraghi
01/01/2015
Article
Determinants of community structure in the global plankton interactome
Science , 2015 , 348 (6237) , pp. 1262073
Gipsi Lima-Mendez
Karoline Faust
Nicolas Henry
Johan Decelle
Sébastien Colin
Fabrizio Carcillo
Samuel Chaffron
J. Cesar Ignacio-Espinosa
Simon Roux
Flora Vincent
et al.
01/01/2015
Article
Life-cycle modification in open oceans accounts for genome variability in a cosmopolitan phytoplankton
The International Society of Microbiologial Ecology Journal , 2015 , 9 (6) , pp. 1365–1377
Peter von Dassow
Uwe John
Hiroyuki Ogata
Ian Probert
El Mahdi Bendif
Jessica U Kegel
Stéphane Audic
Patrick Wincker
Corinne da Silva
Jean-Michel Claverie
et al.
01/01/2015
Article
The use of -omic tools in the study of disease processes in marine bivalve mollusks
Journal of Invertebrate Pathology , 2015 , 131 , pp. 137-154
Marta Gomez-Chiarri
Ximing Guo
Arnaud Tanguy
Yan He
Dina Proestou
01/01/2015
Article
Transcriptomic response of the hydrothermal mussel Bathymodiolus azoricus in experimental exposure to heavy metals is modulated by the Pgm genotype and symbiont content
Marine Genomics , 2015 , 21 , pp. 63-73
Marion Bougerol
Isabelle Boutet
Dominique Leguen
Didier Jollivet
Arnaud Tanguy
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