Archives Hal
01/01/2019
Article
Observational Needs Supporting Marine Ecosystems Modeling and Forecasting: From the Global Ocean to Regional and Coastal Systems
Frontiers in Marine Science , 2019 , 6 , pp. 623
Antonietta Capotondi
Michael Jacox
Chris Bowler
Maria Kavanaugh
Patrick Lehodey
Daniel Barrie
Stephanie Brodie
Samuel Chaffron
Wei Cheng
Daniela Dias
et al.
01/01/2019
Article
Revisiting the Lepetodrilus elevatus species complex (Vetigastropoda: Lepetodrilidae), using samples from the Galápagos and Guaymas hydrothermal vent systems
Journal of Molluscan Studies , 2019 , 85 (1) , pp. 154-165
Marjolaine Matabos
Didier Jollivet
01/01/2019
Article
High rates of apoptosis visualized in the symbiont-bearing gills of deep-sea Bathymodiolus mussels
PLoS ONE , 2019 , 14 (2) , pp. e0211499
Bérénice Piquet
Bruce Shillito
François H. Lallier
Sébastien Duperron
Ann Andersen
01/01/2019
Article
Rhythmicity of coastal marine picoeukaryotes, bacteria and archaea despite irregular environmental perturbations
The International Society of Microbiologial Ecology Journal , 2019 , 13 (2) , pp. 388-401
Stefan Lambert
Margot Tragin
Jean-Claude Lozano
Jean-François Ghiglione
Daniel Vaulot
François-Yves Bouget
Pierre Galand
01/01/2019
Article
Habitat type drives the distribution of non-indigenous species in fouling communities regardless of associated maritime traffic
Diversity and Distributions , 2019 , 0 , pp. 1 - 14
Jean‐charles Leclerc
Frédérique Viard
Elizabeth González Sepúlveda
Christian Díaz
José Neira Hinojosa
Karla Pérez Araneda
Francisco J. Silva
Antonio Brante
01/01/2019
Article
A review of the characteristics of the dinoflagellate parasite Ichthyodinium chabelardi and its potential effect on fin fish populations
Marine and Freshwater Research , 2019 , 70 (9) , pp. 1307-1316
Frank H Gleason
Maitreyi Nagarkar
Aurélie Chambouvet
Laure Guillou
01/01/2019
Article
Experimental and survey-based evidences for effective biotic resistance by predators in ports
Biological Invasions , 2019
Jean-Charles Leclerc
Frédérique Viard
Antonio Brante
01/01/2019
Article
A genome‐wide investigation of the worldwide invader Sargassum muticum shows high success albeit (almost) no genetic diversity
Evolutionary Applications , 2019 , 13 , pp. 500-514
Sabrina Le Cam
Claire Daguin-Thiébaut
Sarah Bouchemousse
Aschwin Engelen
Nova Mieszkowska
Frédérique Viard
01/01/2019
Article
Global host molecular perturbations upon in situ loss of bacterial endosymbionts in the deep-sea mussel Bathymodiolus azoricus assessed using proteomics and transcriptomics
BMC Genomics , 2019 , 20 , pp. 109
Camille Detree
Iman Haddad
Emmanuelle Demey-Thomas
Joelle Vinh
François Lallier
Arnaud Tanguy
Jean Mary
28/12/2018
Article
Cryptic frenulates are the dominant chemosymbiotrophic fauna at Arctic and high latitude Atlantic cold seeps
PLoS ONE , 2018 , 13 (12) , pp. e0209273
Arunima Sen
Sébastien Duperron
Stéphane Hourdez
Bérénice Piquet
Nelly Léger
Andrey Gebruk
Anne-Sophie Le Port
Mette Marianne Svenning
Ann C Andersen
05/12/2018
Article
Summer shifts of bacterial communities associated with the invasive brown seaweed Sargassum muticum are location and tissue dependent
PLoS ONE , 2018 , 13 (12) , pp. e0206734
Alexandra Serebryakova
Tânia Aires
Frédérique Viard
Ester Serrão
Aschwin H. Engelen
01/12/2018
Article
Delineation of metals and radionuclides bioconcentration in eggs of seabream Sparus aurata and effect of environmental pCO2
Journal of Environmental Radioactivity , 2018 , 192 , pp. 426-433
Thomas Lacoue-Labarthe
François Oberhänsli
Jean-Louis Teyssié
Sophie Martin
01/12/2018
Article
Development and implementation of eco-genomic tools for aquatic ecosystem biomonitoring: the SYNAQUA French-Swiss program
Environmental Science and Pollution Research , 2018 , 25 (34) , pp. 33858-33866
Estelle Lefrancois
Laure Apothéloz-Perret-Gentil
Philippe Blancher
Samuel Botreau
Cécile Chardon
Laura Crepin
Tristan Cordier
Arielle Cordonier
Isabelle Domaizon
Benoit Ferrari
et al.
01/12/2018
Article
Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans
Nature Communications , 2018 , 9 , pp. 310
Yoann Seeleuthner
Samuel Mondy
Vincent Lombard
Quentin Carradec
Eric Pelletier
Marc Wessner
Jade Leconte
Jean-François Mangot
Julie Poulain
Karine Labadie
et al.
01/12/2018
Article
Fine structure and Molecular Phylogenetic Position of Two Marine Gregarines, Selenidium pygospionis sp. n. and S. pherusae sp. n., with Notes on the Phylogeny of Archigregarinida (Apicomplexa)
Protist , 2018 , 169 (6) , pp. 826-852
Gita Paskerova
Tatiana Miroliubova
Andrei Diakin
Magdaléna Kováčiková
Andrea Valigurová
Laure Guillou
Vladimir Aleoshin
Timur Simdyanov
01/12/2018
Article
A global ocean atlas of eukaryotic genes
Nature Communications , 2018 , 9 (1) , pp. 373
Quentin Carradec
Eric Pelletier
Corinne da Silva
Adriana A. Alberti
Yoann Seeleuthner
Romain Blanc-Mathieu
Gipsi Lima-Mendez
Fabio Rocha
Leila Tirichine
Karine Labadie
et al.
01/12/2018
Rapport
An assessment of French Mediterranean benthic habitats' sensitivity to physical pressures
, 2018 , pp. 86 pages
Marie La Rivière
Noëmie Michez
Annabelle Aish
Denise Bellan-Santini
Gérard Bellan
Pierre Chevaldonné
Jean-Claude Dauvin
Sandrine Derrien-Courtel
Jacques Grall
Laurent Guérin
et al.
01/12/2018
Article
Nanoplanktonic diatoms are globally overlooked but play a role in spring blooms and carbon export
Nature Communications , 2018 , 9 (1) , pp. 953
Karine Leblanc
Bernard Queguiner
Frederic Diaz
Veronique Cornet
Mónica Michel-Rodriguez
Xavier Durrieu de Madron
Chris Bowler
Shruti Malviya
Melilotus Thyssen
Gérald Grégori
et al.
01/12/2018
Article
Unknown Widespread Iron- and Sulfur-Oxidizing Bacteria beneath the East Antarctic Ice Sheet
Paleontological Journal / Paleontologicheskii Zhurnal , 2018 , 52 (10) , pp. 1196-1203
S. Bulat
M. Doronin
G. Pavlov
D. Karlov
D. Marie
J.-R. Petit
15/11/2018
Article
Mollusc genomes reveal variability in patterns of LTR-retrotransposons dynamics
BMC Genomics , 2018 , 19 , pp. 821
Camille Thomas-Bulle
Mathieu Piednoël
Tifenn Donnart
Jonathan Filée
Didier Jollivet
Eric Bonnivard
01/11/2018
Article
Clarifying the Relationships between Microsporidia and Cryptomycota
Journal of Eukaryotic Microbiology , 2018 , 65 (6) , pp. 773-782
David Bass
Lucas Czech
Bryony Williams
Cédric Berney
Micah Dunthorn
Frederic Mahé
Guifré Torruella
Grant Stentiford
Tom Williams
01/11/2018
Article
The chaotic history of using vinegar injections to control Acanthaster spp. populations. A comment to Boström-Einarsson L., Bonin M. C., Moon S. and Firth S. (2018). Environmental impact monitoring of household vinegar-injections to cull crown-of-...
Ocean and Coastal Management , 2018 , 165 , pp. 434-435
Pascal Dumas
Suzanne Mills
Grégoire Moutardier
Sompert Gereva
Ricardo Beldade
Jayven Ham
Rocky Kaku
Mehdi Adjeroud
01/11/2018
Article
Marine sublittoral benthos fails to track temperature in response to climate change in a biogeographical transition zone
ICES Journal of Marine Science , 2018 , 75 (6) , pp. 1894-1907
François Gaudin
Nicolas Desroy
Stanislas Dubois
Caroline Broudin
Louis Cabioch
Jérôme Fournier
Franck Gentil
Jacques Grall
Céline Houbin
Patrick Le Mao
et al.
01/11/2018
Article
Effect of CO2–induced ocean acidification on the early development and shell mineralization of the European abalone (Haliotis tuberculata)
Journal of Experimental Marine Biology and Ecology , 2018 , 508 , pp. 52 - 63
Nathalie Wessel
Sophie Martin
Aïcha Badou
Philippe Dubois
Sylvain Huchette
Vivien Julia
Flavia Nunes
Ewan Harney
Christine Paillard
Stéphanie Auzoux-Bordenave
01/11/2018
Article
Rhizarian ‘Novel Clade 10’ Revealed as Abundant and Diverse Planktonic and Terrestrial Flagellates, including Aquavolon n. gen.
Journal of Eukaryotic Microbiology , 2018 , 65 (6) , pp. 828-842
David Bass
Denis Victorovich Tikhonenkov
Rachel Foster
Patricia Dyal
Jan Janouškovec
Patrick Keeling
Michelle Gardner
Sigrid Neuhauser
Hanna Hartikainen
Alexandre Mylnikov
et al.
01/11/2018
Article
First Ultrastructural and Molecular Phylogenetic Evidence from the Blastogregarines, an Early Branching Lineage of Plesiomorphic Apicomplexa
Protist , 2018 , 169 (5) , pp. 697-726
Timur Simdyanov
Gita Paskerova
Andrea Valigurová
Andrei Diakin
Magdaléna Kováčiková
Joseph Schrével
Laure Guillou
Andrej Dobrovolskij
Vladimir Aleoshin
02/10/2018
Poster
POLYSALGUE Project: Production of low molecular weight exopolysaccharides from microalgae for nutraceutical application
Claire Toucheteau
Clément Gaignard
Céline Laroche
Ian Probert
Olivier Goncalves Gonçalves
Didier Le Cerf
Philippe Michaud
Ingrid Fruitier-Arnaudin
Nicolas Bridiau
Thierry Maugard
02/10/2018
Article
Comparative Time-Scale Gene Expression Analysis Highlights the Infection Processes of Two Amoebophrya Strains
Frontiers in Microbiology , 2018 , 9
Sarah Farhat
Isabelle Florent
Benjamin Noël
Ehsan Kayal
Corinne da Silva
Estelle Bigeard
Adriana A. Alberti
Karine Labadie
Erwan Corre
Jean-Marc Aury
et al.
01/10/2018
Article
Eastern spread of the invasive Artemia franciscana in the Mediterranean Basin, with the first record from the Balkan Peninsula
Hydrobiologia , 2018 , 822 (1) , pp. 229-235
Zsófia Horváth
Christophe Lejeusne
Francisco Amat
Javier Sánchez-Fontenla
Csaba Vad
Andy Green
01/10/2018
Article
Population genomics of the introduced and cultivated Pacific kelp Undaria pinnatifida : Marinas-not farms-drive regional connectivity and establishment in natural rocky reefs
Evolutionary Applications , 2018 , 11 (9) , pp. 1582 - 1597
Jaromir Guzinski
Marion Ballenghien
Claire Daguin-Thiébaut
Laurent Lévêque
Frédérique Viard
17/09/2018
Article
EukRef: Phylogenetic curation of ribosomal RNA to enhance understanding of eukaryotic diversity and distribution
PLoS Biology , 2018 , 16 (9) , pp. e2005849
Javier del Campo
Martin Kolisko
Vittorio Boscaro
Luciana Santoferrara
Serafim Nenarokov
Ramon Massana
Laure Guillou
Alastair Simpson
Cedric Berney
Colomban de Vargas
et al.
01/09/2018
Article
dinoref : A curated dinoflagellate (Dinophyceae) reference database for the 18S rRNA gene
Molecular Ecology Resources , 2018 , 18 (5) , pp. 974-987
Solenn Mordret
Roberta Piredda
Daniel Vaulot
Marina Montresor
Wiebe Kooistra
Diana Sarno
01/09/2018
Article
Environmental Sequencing Fills the Gap Between Parasitic Haplosporidians and Free-living Giant Amoebae
Journal of Eukaryotic Microbiology , 2018 , 65 (5) , pp. 574 - 586
Georgia M Ward
Sigrid Neuhauser
René Groben
Stefan Ciaghi
Cedric Berney
Sarah Romac
David Bass
01/09/2018
Article
Molecular analyses of protists in long-term observation programmes—current status and future perspectives
Journal of Plankton Research , 2018 , 40 (5) , pp. 519-536
Rowena Stern
Alexandra Kraberg
Eileen Bresnan
Wiebe Kooistra
Connie Lovejoy
Marina Montresor
Xosé Anxelu G Morán
Fabrice Not
Rafael Salas
Raffaele Siano
et al.
31/08/2018
Article
Protists Within Corals: The Hidden Diversity
Frontiers in Microbiology , 2018 , 9 , pp. 2043
Camille Clerissi
Sébastien Brunet
Jeremie Vidal-Dupiol
Mehdi Adjeroud
Pierre Lepage
Laure Guillou
Eve Toulza
Jean-Michel Escoubas
10/08/2018
Article
Ultra-Violet Radiation Has a Limited Impact on Seasonal Differences in the Acropora Muricata Holobiont
Frontiers in Marine Science , 2018 , 5
Jeroen A. J. M. van de Water
Lucile Courtial
Fanny Houlbreque
Stéphan Jacquet
Christine Ferrier-Pages
01/07/2018
Article
Specialized proteomic responses and an ancient photoprotection mechanism sustain marine green algal growth during phosphate limitation
Nature Microbiology , 2018 , 3 (7) , pp. 781-790
Jian Guo
Susanne Wilken
Valeria Jimenez
Chang Jae Choi
Charles Ansong
Richard Dannebaum
Lisa Sudek
David Milner
Charles Bachy
Emily Nahas Reistetter
et al.
01/07/2018
Article
Abundance and observations of thermophilic microbial and viral communities in submarine and terrestrial hot fluid systems of the French Southern and Antarctic Lands
Polar Biology , 2018 , 41 (7) , pp. 1335-1352
Kaarle Parikka
Stéphan Jacquet
Jonathan Colombet
Damien Guillaume
Marc Le Romancer
25/06/2018
Article
Comparison of photosynthetic performances of marine picocyanobacteria with different configurations of the oxygen-evolving complex
Photosynthesis Research , 2018 , 138 (1) , pp. 57 - 71
Frédéric Partensky
Daniella Mella-Flores
Christophe Six
Laurence Garczarek
Mirjam Czjzek
Dominique Marie
Eva Kotabová
Kristina Felcmanová
Ondřej Prášil
14/06/2018
Article
Metabarcoding analysis on European coastal samples reveals new molecular metazoan diversity
Scientific Reports , 2018 , 8 , pp. 9106
David López-Escardó
Jordi Paps
Colomban de Vargas
Ramon Massana
Iñaki Ruiz-Trillo
Javier del Campo
10/06/2018
Comm. dans un congrès
Coupling GD-OES and XPS profiling to perform advanced physico-chemical characterizations of III-V layers for photovoltaic applications
, 2018 , pp. 0066-0070
Anais Loubat
Solène Béchu
Muriel Bouttemy
Céline Eypert
Sofia Gaiaschi
Mathieu Frégnaux
Damien Aureau
Jackie Vigneron
Nathalie Simon
Patrick Chapon
et al.
05/06/2018
Comm. dans un congrès
Rhizaria: An unexpected role in the carbon biological pump, and in the silica cycle
Aude Leynaert
Natalia Llopis-Monferrer
Miguel Mendez-Sandin
Fabrice Not
Paul Tréguer
29/05/2018
Comm. dans un congrès
Modélisation hydro-sédimentaire du lac de Guerlédan
, 2018 , pp. 165-174
Matthis Auger
Tristan Keroulle
Lou Marill
Marc Pezerat
Arthur Prigent
Valentin Ruault
Amandine Nicolle
01/05/2018
Article
Small eukaryotic phytoplankton communities in tropical waters off Brazil are dominated by symbioses between Haptophyta and nitrogen-fixing cyanobacteria
The International Society of Microbiologial Ecology Journal , 2018 , 12 (5) , pp. 1360-1374
Catherine Gérikas Ribeiro
Adriana Lopes dos Santos
Dominique Marie
Frederico Pereira Brandini
Daniel Vaulot
01/05/2018
Article
Impact of ocean acidification and warming on the productivity of a rock pool community
Marine Environmental Research , 2018 , 136 (2) , pp. 78-88
Erwann Legrand
Pascal Riera
Olivier Bohner
Jérôme Coudret
Ferdinand Schlicklin
Marie Derrien
Sophie Martin
01/04/2018
Article
The epibiotic life of the cosmopolitan diatom Fragilariopsis doliolus on heterotrophic ciliates in the open ocean
ISME Journal , 2018 , 12 (4) , pp. 1094 - 1108
Flora J. Vincent
Sébastien Colin
Sarah Romac
Eleonora Scalco
Lucie Bittner
Yonara Garcia
Rubens M. Lopes
John R. Dolan
Adriana Zingone
Colomban de Vargas
et al.
01/04/2018
Article
Correction to: Genetic and morphological sex identification methods reveal a male-biased sex ratio in the Ivory Gull Pagophila eburnea
Wilson journal of ornithology , 2018 , 159 (2) , pp. 597-597
Glenn Yannic
Thomas Broquet
Hallvard Strøm
Adrian Aebischer
Christophe Dufresnes
Maria Gavrilo
H. Grant Gilchrist
Mark Mallory
R. Guy Morrison
Brigitte Sabard
et al.
30/03/2018
Article
Acidification increases abundances of Vibrionales and Planctomycetia associated to a seaweed-grazer system: potential consequences for disease and prey digestion efficiency
PeerJ , 2018 , 6 , pp. e4377
Tânia Aires
Alexandra Serebryakova
Frédérique Viard
Ester A. Serrão
Aschwin H. Engelen
21/03/2018
Article
Analysis of the genomic basis of functional diversity in dinoflagellates using a transcriptome-based sequence similarity network.
Molecular Ecology , 2018 , 27 (10) , pp. 2365-2380
Arnaud Meng
Erwan Corre
Ian Probert
Andres Gutierrez-Rodriguez
Raffaele Siano
Anita Annamalé
Adriana A. Alberti
Corinne da Silva
Patrick Wincker
Stéphane Le Crom
et al.
01/03/2018
Article
Patterns and drivers of deep chlorophyll maxima structure in 100 lakes: The relative importance of light and thermal stratification
Limnology and Oceanography Bulletin , 2018 , 63 (2) , pp. 628-646
Taylor H Leach
Beatrix E Beisner
Cayelan Carey
Patricia Pernica
Kevin C Rose
Yannick Huot
Jennifer A Brentrup
Isabelle Domaizon
Hans-Peter Grossart
Bastiaan Ibelings
et al.
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