Hal Archives
06/17/2019
Comm. dans un congrès
Contribution of siliceous Rhizaria in the marine silica and carbon cycle
Aude Leynaert
Natalia Llopis-Monferrer
Paul Tréguer
Fabrice Not
06/01/2019
Article
Grazers increase the sensitivity of coralline algae to ocean acidification and warming
Journal of Sea Research (JSR) , 2019 , 148 , pp. 1-7
Erwann Legrand
Pascal Riera
Mathieu Lutier
Jérôme Coudret
Jacques Grall
Sophie Martin
05/15/2019
Article
Unravelling the global invasion routes of a worldwide invader, the red swamp crayfish (<i>Procambarus clarkii</i>)
Freshwater Biology , 2019 , 64 (8) , pp. 1382-1400
Francisco Oficialdegui
Miguel Clavero
Marta Sánchez
Andy J Green
Luz Boyero
Thomas Michot
Kristie Klose
Tadashi Kawai
Christophe Lejeusne
04/24/2019
Article
An aerobic eukaryotic parasite with functional mitochondria that likely lacks a mitochondrial genome
Science Advances , 2019 , 5 (4) , pp. eaav1110
Uwe John
Yameng Lu
Sylke Wohlrab
Marco Groth
Jan Janouškovec
Gurjeet S Kohli
Felix Mark
Ulf Bickmeyer
Sarah Farhat
Marius Felder
et al.
04/15/2019
Article
Single cell genomics yields a wide diversity of small planktonic protists across major ocean ecosystems
Scientific Reports , 2019 , 9 (1) , pp. 6025
M. Sieracki
N. Poulton
Olivier Jaillon
P. Wincker
C. de Vargas
L. Rubinat-Ripoll
R. Stepanauskas
R. Logares
R. Massana
04/01/2019
Article
Spatio-temporal dynamics of density-dependent dispersal during a population colonisation
Ecology Letters , 2019 , 22 (4) , pp. 634-644
Sebastiano de Bona
Matthieu Bruneaux
Alex Lee
David Reznick
Paul Bentzen
Andres Lopez-Sepulcre
04/01/2019
Article
High contribution of Rhizaria (Radiolaria) to vertical export in the California Current Ecosystem revealed by DNA metabarcoding
The International Society of Microbiologial Ecology Journal , 2019 , 13 (4) , pp. 964-976
Andres Gutierrez-Rodriguez
Michael R. Stukel
Adriana Lopes dos Santos
Tristan Biard
Renate Scharek
Daniel Vaulot
Michael Landry
Fabrice Not
03/28/2019
Article
Community‐Level Responses to Iron Availability in Open Ocean Plankton Ecosystems
Global Biogeochemical Cycles , 2019 , 33 (3) , pp. 391-419
Luigi Caputi
Quentin Carradec
Damien Eveillard
Amos Kirilovsky
Eric Pelletier
Juan Pierella Karlusich
Fabio Rocha Jimenez Vieira
Emilie Villar
Samuel Chaffron
Shruti Malviya
et al.
03/26/2019
Article
Interplay between differentially expressed enzymes contributes to light color acclimation in marine Synechococcus
Proceedings of the National Academy of Sciences of the United States of America , 2019 , 116 (13) , pp. 6457-6462
Joseph E Sanfilippo
Adam A Nguyen
Laurence Garczarek
Jonathan A Karty
Suman Pokhrel
Johann A Strnat
Frédéric Partensky
Wendy M Schluchter
David M Kehoe
03/01/2019
Article
Changes in planktonic microbial components in interaction with juvenile oysters during a mortality episode in the Thau lagoon (France)
Aquaculture , 2019 , 503 , pp. 231-241
Marion Richard
Beatrice Bec
Charles Vanhuysse
Sébastien Mas
David Parin
Camila Chantalat
Patrick Le Gall
Annie Fiandrino
Franck Lagarde
Serge Mortreux
et al.
02/05/2019
Article
A community perspective on the concept of marine holobionts: state-of-the-art, challenges, and future directions
PeerJ Preprints , 2019 , 7 , pp. e27519v1
Simon Dittami
Enrique Arboleda
J.-C. Auguet
Arite Bigalke
Enora Briand
Paco Cárdenas
Ulisse Cardini
Johan Decelle
Ashwin Engelen
Damien Eveillard
et al.
02/01/2019
Article
Coupling between taxonomic and functional diversity in protistan coastal communities
Environmental Microbiology , 2019 , 21 (2) , pp. 730-749
Pierre Ramond
Marc Sourisseau
Nathalie Simon
Sarah Romac
Sophie Schmitt
Fabienne Rigaut-Jalabert
Nicolas Henry
Colomban de Vargas
Raffaele Siano
01/09/2019
Article
First Viruses Infecting the Marine Diatom Guinardia delicatula
Frontiers in Microbiology , 2019 , 9 , pp. 3235
Laure Arsenieff
Nathalie Simon
Fabienne Rigaut-Jalabert
Florence Le Gall
Samuel Chaffron
Erwan Corre
Emmanuelle Com
Estelle Bigeard
Anne-Claire Baudoux
01/06/2019
Comm. dans un congrès
Degradation dynamics processes and macrofauna communities successions within drift kelp accumulations: an in-situ experimental approach
Florian de Bettignies
Patrick Dauby
François Thomas
Maéva Brunet
Angélique Gobet
Ludovic Delage
Olivier Bohner
Stéphane Loisel
Dominique Davoult
01/01/2019
Rapport
Typologie des habitats marins benthiques de la Manche, de la Mer du Nord et de l'Atlantique VERSION 3
, 2019 , pp. 52 p.
Noëmie Michez
Éric Thiébaut
Stanislas Dubois
Line Le Gall
Jean-Claude Dauvin
Ann Andersen
Alexandrine Baffreau
Touria Bajjouk
Hugues Blanchet
Thibaut de Bettignies
et al.
01/01/2019
Article
Habitat type drives the distribution of non-indigenous species in fouling communities regardless of associated maritime traffic
Diversity and Distributions , 2019 , 0 , pp. 1 - 14
Jean‐charles Leclerc
Frédérique Viard
Elizabeth González Sepúlveda
Christian Díaz
José Neira Hinojosa
Karla Pérez Araneda
Francisco J. Silva
Antonio Brante
01/01/2019
Article
Observational Needs Supporting Marine Ecosystems Modeling and Forecasting: From the Global Ocean to Regional and Coastal Systems
Frontiers in Marine Science , 2019 , 6 , pp. 623
Antonietta Capotondi
Michael Jacox
Chris Bowler
Maria Kavanaugh
Patrick Lehodey
Daniel Barrie
Stephanie Brodie
Samuel Chaffron
Wei Cheng
Daniela Dias
et al.
01/01/2019
Article
Rhythmicity of coastal marine picoeukaryotes, bacteria and archaea despite irregular environmental perturbations
The International Society of Microbiologial Ecology Journal , 2019 , 13 (2) , pp. 388-401
Stefan Lambert
Margot Tragin
Jean-Claude Lozano
Jean-François Ghiglione
Daniel Vaulot
François-Yves Bouget
Pierre Galand
01/01/2019
Article
Revisions to the Classification, Nomenclature, and Diversity of Eukaryotes
Journal of Eukaryotic Microbiology , 2019 , 66 , pp. 4-119
Sina Adl
David Bass
Christopher Lane
Julius Lukeš
Conrad Schoch
Alexey Smirnov
Sabine Agatha
Cédric Berney
Matthew Brown
Fabien Burki
et al.
01/01/2019
Article
New horizons in culture and valorization of red microalgae
Biotechnology Advances , 2019 , 37 (1) , pp. 193-222
Sébastien Jubeau
Carole Vialleix
Jean-Paul Cadoret
Ian Probert
Clément Gaignard
Nesrine Gargouch
Pascal Dubessay
Cédric Delattre
Guillaume Pierre
Céline Laroche
et al.
01/01/2019
Article
Marine DNA viral macro- and microdiversity from Pole to Pole
Cell , 2019 , 177 (5) , pp. 1109-1123.e14
Ann Gregory
Ahmed Zayed
Nádia Conceição-Neto
Ben Temperton
Ben Bolduc
Adriana A. Alberti
Mathieu Ardyna
Ksenia Arkhipova
Margaux Carmichael
Corinne Cruaud
et al.
01/01/2019
Article
Sexual isolation with and without ecological isolation in marine isopods Jaera albifrons and J. praehirsuta
Journal of Evolutionary Biology , 2019
Ambre Ribardière
Elsa Pabion
Jérôme Coudret
Claire Daguin-Thiébaut
Céline Houbin
Stéphane Loisel
Sébastien Henry
Thomas Broquet
01/01/2019
Article
Genetic variability and transgenerational regulation of investment in sex in the monogonont rotifer Brachionus plicatilis
Journal of Evolutionary Biology , 2019
Océane Seudre
Eloïse Vanhoenacker
Stéphane Mauger
Jérôme Coudret
Denis Roze
01/01/2019
Article
High rates of apoptosis visualized in the symbiont-bearing gills of deep-sea Bathymodiolus mussels
PLoS ONE , 2019 , 14 (2) , pp. e0211499
Bérénice Piquet
Bruce Shillito
François H. Lallier
Sébastien Duperron
Ann Andersen
01/01/2019
Article
Spatial heterogeneity and hydrological fluctuations drive bacterioplankton community composition in an Amazon floodplain system
PLoS ONE , 2019 , 14 (8) , pp. e0220695
Mariana Câmara dos Reis
Inessa Lacativa Bagatini
Luciana de Oliveira Vidal
Marie-Paule Bonnet
David da Motta Marques
Hugo Sarmento
01/01/2019
Article
Tracing the Evolution of the Plastome and Mitogenome in the Chloropicophyceae Uncovered Convergent tRNA Gene Losses and a Variant Plastid Genetic Code
Genome Biology and Evolution , 2019 , 11 (4) , pp. 1275-1292
Monique Turmel
Adriana Lopes dos Santos
Christian Otis
Roxanne Sergerie
Claude Lemieux
01/01/2019
Article
Individual consistency in the non-breeding behavior of a long-distance migrant seabird, the Grey Petrel Procellaria cinerea
Marine Ornithology , 2019 , 47 (1) , pp. 93-103
Karine Delord
Christophe Barbraud
David Pinaud
Stéphanie Ruault
Samantha Clare Patrick
Henri Weimerskirch
01/01/2019
Article
Widespread diminishing anthropogenic effects on calcium in freshwaters
Scientific Reports , 2019 , 9 (1) , pp. 1-10
Gesa A Weyhenmeyer
Jens Hartmann
Dag O Hessen
Jiří Kopáček
Josef Hejzlar
Stéphan Jacquet
Stephen K Hamilton
Piet Verburg
Taylor H Leach
Martin Schmid
et al.
01/01/2019
Article
Cryptic Diversity and Database Errors Challenge Non-indigenous Species Surveys: An Illustration With Botrylloides spp. in the English Channel and Mediterranean Sea
Frontiers in Marine Science , 2019 , 6 , pp. 615
Frédérique Viard
Charlotte Roby
Xavier Turon
Sarah Bouchemousse
John Bishop
01/01/2019
Article
Mixotrophic protists display contrasted biogeographies in the global ocean
ISME Journal , 2019 , 13 (4) , pp. 1072-1083
Emile Faure
Fabrice Not
Anne-Sophie Benoiston
Karine Labadie
Lucie Bittner
Sakina-Dorothée Ayata
01/01/2019
Article
Picoeukaryotes of the Micromonas genus: sentinels of a warming ocean
The International Society of Microbiologial Ecology Journal , 2019 , 13 (1) , pp. 132-146
David Demory
Anne-Claire Baudoux
Adam Monier
Nathalie Simon
Christophe Six
Pei Ge
Fabienne Rigaut-Jalabert
Dominique Marie
Antoine Sciandra
Olivier Bernard
et al.
01/01/2019
Article
A genome‐wide investigation of the worldwide invader Sargassum muticum shows high success albeit (almost) no genetic diversity
Evolutionary Applications , 2019 , 13 , pp. 500-514
Sabrina Le Cam
Claire Daguin-Thiébaut
Sarah Bouchemousse
Aschwin Engelen
Nova Mieszkowska
Frédérique Viard
01/01/2019
Article
Global host molecular perturbations upon in situ loss of bacterial endosymbionts in the deep-sea mussel Bathymodiolus azoricus assessed using proteomics and transcriptomics
BMC Genomics , 2019 , 20 , pp. 109
Camille Detree
Iman Haddad
Emmanuelle Demey-Thomas
Joelle Vinh
François Lallier
Arnaud Tanguy
Jean Mary
01/01/2019
Article
Time Calibrated Morpho-molecular Classification of Nassellaria (Radiolaria)
Protist , 2019 , 170 (2) , pp. 187-208
Miguel M Sandin
Loïc Pillet
Tristan Biard
Camille Poirier
Estelle Bigeard
Sarah Romac
Noritoshi Suzuki
Fabrice Not
01/01/2019
Article
Revisiting the Lepetodrilus elevatus species complex (Vetigastropoda: Lepetodrilidae), using samples from the Galápagos and Guaymas hydrothermal vent systems
Journal of Molluscan Studies , 2019 , 85 (1) , pp. 154-165
Marjolaine Matabos
Didier Jollivet
01/01/2019
Article
A review of the characteristics of the dinoflagellate parasite Ichthyodinium chabelardi and its potential effect on fin fish populations
Marine and Freshwater Research , 2019 , 70 (9) , pp. 1307-1316
Frank H Gleason
Maitreyi Nagarkar
Aurélie Chambouvet
Laure Guillou
01/01/2019
Article
Experimental and survey-based evidences for effective biotic resistance by predators in ports
Biological Invasions , 2019
Jean-Charles Leclerc
Frédérique Viard
Antonio Brante
12/28/2018
Article
Cryptic frenulates are the dominant chemosymbiotrophic fauna at Arctic and high latitude Atlantic cold seeps
PLoS ONE , 2018 , 13 (12) , pp. e0209273
Arunima Sen
Sébastien Duperron
Stéphane Hourdez
Bérénice Piquet
Nelly Léger
Andrey Gebruk
Anne-Sophie Le Port
Mette Marianne Svenning
Ann C Andersen
12/05/2018
Article
Summer shifts of bacterial communities associated with the invasive brown seaweed Sargassum muticum are location and tissue dependent
PLoS ONE , 2018 , 13 (12) , pp. e0206734
Alexandra Serebryakova
Tânia Aires
Frédérique Viard
Ester Serrão
Aschwin H. Engelen
12/01/2018
Rapport
An assessment of French Mediterranean benthic habitats' sensitivity to physical pressures
, 2018 , pp. 86 pages
Marie La Rivière
Noëmie Michez
Annabelle Aish
Denise Bellan-Santini
Gérard Bellan
Pierre Chevaldonné
Jean-Claude Dauvin
Sandrine Derrien-Courtel
Jacques Grall
Laurent Guérin
et al.
12/01/2018
Article
Nanoplanktonic diatoms are globally overlooked but play a role in spring blooms and carbon export
Nature Communications , 2018 , 9 (1) , pp. 953
Karine Leblanc
Bernard Queguiner
Frederic Diaz
Veronique Cornet
Mónica Michel-Rodriguez
Xavier Durrieu de Madron
Chris Bowler
Shruti Malviya
Melilotus Thyssen
Gérald Grégori
et al.
12/01/2018
Article
Single-cell genomics of multiple uncultured stramenopiles reveals underestimated functional diversity across oceans
Nature Communications , 2018 , 9 , pp. 310
Yoann Seeleuthner
Samuel Mondy
Vincent Lombard
Quentin Carradec
Eric Pelletier
Marc Wessner
Jade Leconte
Jean-François Mangot
Julie Poulain
Karine Labadie
et al.
12/01/2018
Article
A global ocean atlas of eukaryotic genes
Nature Communications , 2018 , 9 (1) , pp. 373
Quentin Carradec
Eric Pelletier
Corinne da Silva
Adriana A. Alberti
Yoann Seeleuthner
Romain Blanc-Mathieu
Gipsi Lima-Mendez
Fabio Rocha
Leila Tirichine
Karine Labadie
et al.
12/01/2018
Article
Unknown Widespread Iron- and Sulfur-Oxidizing Bacteria beneath the East Antarctic Ice Sheet
Paleontological Journal / Paleontologicheskii Zhurnal , 2018 , 52 (10) , pp. 1196-1203
S. Bulat
M. Doronin
G. Pavlov
D. Karlov
D. Marie
J.-R. Petit
12/01/2018
Article
Fine structure and Molecular Phylogenetic Position of Two Marine Gregarines, Selenidium pygospionis sp. n. and S. pherusae sp. n., with Notes on the Phylogeny of Archigregarinida (Apicomplexa)
Protist , 2018 , 169 (6) , pp. 826-852
Gita Paskerova
Tatiana Miroliubova
Andrei Diakin
Magdaléna Kováčiková
Andrea Valigurová
Laure Guillou
Vladimir Aleoshin
Timur Simdyanov
12/01/2018
Article
Delineation of metals and radionuclides bioconcentration in eggs of seabream Sparus aurata and effect of environmental pCO2
Journal of Environmental Radioactivity , 2018 , 192 , pp. 426-433
Thomas Lacoue-Labarthe
François Oberhänsli
Jean-Louis Teyssié
Sophie Martin
12/01/2018
Article
Development and implementation of eco-genomic tools for aquatic ecosystem biomonitoring: the SYNAQUA French-Swiss program
Environmental Science and Pollution Research , 2018 , 25 (34) , pp. 33858-33866
Estelle Lefrancois
Laure Apothéloz-Perret-Gentil
Philippe Blancher
Samuel Botreau
Cécile Chardon
Laura Crepin
Tristan Cordier
Arielle Cordonier
Isabelle Domaizon
Benoit Ferrari
et al.
11/15/2018
Article
Mollusc genomes reveal variability in patterns of LTR-retrotransposons dynamics
BMC Genomics , 2018 , 19 , pp. 821
Camille Thomas-Bulle
Mathieu Piednoël
Tifenn Donnart
Jonathan Filée
Didier Jollivet
Eric Bonnivard
11/01/2018
Article
Clarifying the Relationships between Microsporidia and Cryptomycota
Journal of Eukaryotic Microbiology , 2018 , 65 (6) , pp. 773-782
David Bass
Lucas Czech
Bryony Williams
Cédric Berney
Micah Dunthorn
Frederic Mahé
Guifré Torruella
Grant Stentiford
Tom Williams
11/01/2018
Article
First Ultrastructural and Molecular Phylogenetic Evidence from the Blastogregarines, an Early Branching Lineage of Plesiomorphic Apicomplexa
Protist , 2018 , 169 (5) , pp. 697-726
Timur Simdyanov
Gita Paskerova
Andrea Valigurová
Andrei Diakin
Magdaléna Kováčiková
Joseph Schrével
Laure Guillou
Andrej Dobrovolskij
Vladimir Aleoshin
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