Hal Archives
01/01/2016
Article
On the Parametric Maximum Likelihood Estimator for Independent but Non-identically Distributed Observations with Application to Truncated Data
Journal of Statistical Theory and Applications , 2016 , 15 (1) , pp. 96
Fanny Leroy
Jean-Yves Dauxois
Pascale Tubert-Bitter
01/01/2016
Rapport
Évaluation de la sensibilité des habitats benthiques de Méditerranée aux pressions physiques,An assessment of French Mediterranean benthic habitats' sensitivity to physical pressures
, 2016 , pp. 101 pp.
Marie La Riviere
Noëmie Michez
Annabelle Aish
Denise Bellan-Santini
Gérard Bellan
Pierre Chevaldonne
Jean-Claude Dauvin
Sandrine Derrien-Courtel
Jacques Grall
L. Guérin
et al.
01/01/2016
Article
Obituary: Gérard BALVAY (1941–2015)
Annales de Limnologie - International Journal of Limnology , 2016 , 52 , pp. 33-34
Stéphan Jacquet
12/01/2015
Article
Deep sequencing of amplified Prasinovirus and host green algal genes from an Indian Ocean transect reveals interacting trophic dependencies and new genotypes
Environmental Microbiology Reports , 2015 , 7 (6) , pp. 979-989
Camille Clerissi
Yves Desdevises
Sarah Romac
Stéphane Audic
Colomban de Vargas
Silvia G Acinas
Raffaela Casotti
Julie Poulain
Patrick Wincker
Pascal Hingamp
et al.
12/01/2015
Article
Marine habitats ecosystem service potential: A vulnerability approach in the Normand-Breton (Saint Malo) Gulf, France
Ecosystem Services , 2015 , 16 , pp. 306-318
Pedro Cabral
H. Levrel
J. Schoenn
Eric Thiébaut
P. Le Mao
R. Mongruel
C. Rollet
K. Dedieu
S. Carrier
E. Morisseau
et al.
12/01/2015
Article
A theoretical analysis of the Allee effect in wind-pollinated cordgrass plant invasions
Theoretical Population Biology , 2015 , 106 , pp. 14-21
James T. Murphy
Mark P. Johnson
11/24/2015
Article
Central role for ferritin in the day/night regulation of iron homeostasis in marine phytoplankton.
Proceedings of the National Academy of Sciences of the United States of America , 2015 , 112 (47) , pp. 14652-7
Hugo Botebol
Emmanuel Lesuisse
Robert Šuták
Christophe Six
Jean-Claude Lozano
Philippe Schatt
Valérie Vergé
Amos Kirilovsky
Joe Morrissey
Thibaut Léger
et al.
11/05/2015
Article
Trophic connectivity between offshore upwelling and the inshore food web of Banc d'Arguin (Mauritania): New insights from isotopic analysis
Estuarine, Coastal and Shelf Science , 2015 , 165 , pp. 149–158
Antoine Carlier
Laurent Chauvaud
Matthijs van Der Geest
François Le Loc’h
Michel Le Duff
Marc Vernet
Jean Raffray
Djibril Diakhaté
Pierre Labrosse
Abdoulaye Wagué
et al.
11/02/2015
Article
Microsatellite markers for the Jaera albifrons species complex (marine isopods)
BMC Research Notes , 2015 , 8 (1) , pp. 632
Ambre Ribardière
Thomas Broquet
Claire Daguin-Thiébaut
11/01/2015
Article
Assessing the physiological responses of the gastropod Crepidula fornicata to predicted ocean acidification and warming
Limnology and Oceanography , 2015 , 61 (2) , pp. 430–444
Fanny Noisette
François Bordeyne
Dominique Davoult
Sophie Martin
11/01/2015
Article
Molecular diversity and distribution of marine fungi across 130 European environmental samples
Proceedings of the Royal Society B: Biological Sciences , 2015 , 282 (1819) , pp. 20152243
Thomas A. Richards
Guy Leonard
Frédéric Mahé
Javier Del Campo
Sarah Romac
Meredith D. M. Jones
Finlay Maguire
Micah Dunthorn
Colomban de Vargas
Ramon Massana
et al.
11/01/2015
Article
Reverse transcriptase genes are highly abundant and transcriptionally active in marine plankton assemblages
The International Society of Microbiologial Ecology Journal , 2015 , 10 (5) , pp. 1134–1146
Magali Lescot
Pascal Hingamp
Kenji K Kojima
Emilie Villar
Sarah Romac
Alaguraj Veluchamy
Martine Boccara
Olivier Jaillon
Daniele Iudicone
Chris Bowler
et al.
11/01/2015
Article
Photosynthesis and calcification in the articulated coralline alga Ellisolandia elongata (Corallinales, Rhodophyta) from intertidal rock pools
European Journal of Phycology , 2015 , 51 (1) , pp. 59-70
Hronn Egilsdottir
Jon Olafsson
Sophie Martin
10/01/2015
Article
Structure and diversity of ssDNA Microviridae viruses in two peri-alpine lakes (Annecy and Bourget, France)
Research in Microbiology , 2015 , 166 (8) , pp. 644-654
Xu Zhong
Baptiste Guidoni
Louis Jacas
Stéphan Jacquet
09/06/2015
Comm. dans un congrès
Resource sudsidies across a micro-temporary estuary to oligotrophic Mediterranean coastal bay (Santu bay, Agriates, Corsica Island).
Nathalie Malet
Jean-Laurent Massey
Marie Garrido
Vanina Pasqualini
Yoann Baldi
Valérie Orsoni
Patrick Rébillout
Béatrice Bec
Vincent Ouisse
09/01/2015
Article
The Size Advantage Model of Sex Allocation in the Protandrous Sex-Changer Crepidula fornicata: Role of the Mating System, Sperm Storage, and Male Mobility
The American Naturalist , 2015 , 186 (3) , pp. 404-420
Thomas Broquet
Audrey Barranger
Emmanuelle Billard
Anastasia Bestin
Rémy Berger
Gaelle Honnaert
Frédérique Viard
09/01/2015
Article
High-throughput sequencing and morphology perform equally well for benthic monitoring of marine ecosystems
Scientific Reports , 2015 , 5 , pp. 13932
Franck Lejzerowicz
Philippe Esling
Loïc Pillet
Thomas A. Wilding
Kenneth D. Black
Jan Pawlowski
09/01/2015
Article
Diversity and distribution of unicellular opisthokonts along the European coast analysed using high-throughput sequencing
Environmental Microbiology , 2015 , 17 (9) , pp. 3195-3207
Javier del Campo
Diego Mallo
Ramon Massana
Colomban de Vargas
Thomas A. Richards
Inaki Ruiz-Trillo
08/24/2015
Article
Using neutral, selected, and hitchhiker loci to assess connectivity of marine populations in the genomic era
Evolutionary Applications , 2015 , 8 (8) , pp. 769-786
Pierre-Alexandre Gagnaire
Thomas Broquet
Didier Aurelle
Frédérique Viard
Ahmed Souissi
François Bonhomme
Sophie Arnaud-Haond
Nicolas Bierne
08/11/2015
Article
Functional Assessment of Residues in the Amino-and Carboxyl-Termini of Crustacean Hyperglycemic Hormone (CHH) in the Mud Crab Scylla olivacea Using Point-Mutated Peptides
PLoS ONE , 2015 , 10 (8) , pp. e0134983
Chun-Jing Liu
Shiau-Shan Huang
Jean-Yves Toullec
Cheng-Yen Chang
Yun-Ru Chen
Wen-San Huang
Chi-Ying Lee
08/09/2015
Article
Co-occurrence and reproductive synchrony do not ensure hybridization between an alien tunicate and its interfertile native congener
Evolutionary Ecology , 2015 , 30 (1) , pp. 69-87
Sarah Bouchemousse
Laurent Lévêque
Guillaume Dubois
Frédérique Viard
08/01/2015
Article
Patchiness of deep-sea communities in Papua New Guinea and potential susceptibility to anthropogenic disturbances illustrated by seep organisms
Marine Ecology , 2015 , 36 (Issue Supplement S1) , pp. 109-132
Sarah Samadi
Nicolas Puillandre
Eric Pante
Marie-Catherine Boisselier
Wei-Jen Chen
Laure Corbari
Philippe Maestrati
Ralph Mana
Justine Thubaut
Dario Zuccon
et al.
08/01/2015
Article
Patchiness of deep-sea communities in Papua New Guinea and potential susceptibility to anthropogenic disturbances illustrated by seep organisms
Marine Ecology , 2015 , 36 (Issue Supplement S1) , pp. 109-132
Sarah Samadi
Nicolas Puillandre
Eric Pante
Marie-Catherine Boisselier
Wei-Jen Chen
Laure Corbari
Philippe Maestrati
Ralph Mana
Justine Thubaut
Dario Zuccon
et al.
07/25/2015
Article
MicRhoDE: a curated database for the analysis of microbial rhodopsin diversity and evolution
Database - The journal of Biological Databases and Curation , 2015 , 2015 , pp. bav080
Dominique Boeuf
Stéphane Audic
Loraine Brillet-Guéguen
Christophe Caron
Christian Jeanthon
07/16/2015
Article
Selective forces acting during multi‑domain protein evolution: the case of multi‑domain globins
SpringerPlus , 2015 , 4 , pp. 354
Joana Cristina Projecto‑garcia
Didier Jollivet
Jean Mary
François Lallier
Stephen W Shaeffer
Stéphane Hourdez
07/01/2015
Article
Relative abundances of methane- and sulfur-oxidizing symbionts in gills of the deep-sea hydrothermal vent mussel Bathymodiolus azoricus under pressure
Deep Sea Research Part I: Oceanographic Research Papers , 2015 , 101 , pp. 7-13
Kamil M. Szafranski
Bérénice Piquet
Bruce Shillito
François Lallier
Sébastien Duperron
07/01/2015
Article
Canopy interactions and physical stress gradients in subtidal communities
Ecology Letters , 2015 , 18 (7) , pp. 677–686
Scott Bennett
Thomas Wernberg
Thibaut de Bettignies
Gary A Kendrick
Robert J Anderson
John J Bolton
Kirsten Rodgers
Nick Shears
Jean-Charles Leclerc
Laurent Lévêque
et al.
07/01/2015
Article
The hydrological context determines the beta-diversity of aerobic anoxygenic phototrophic bacteria in European Arctic seas but does not favor endemism
Frontiers in Microbiology , 2015 , 6 , pp. 638
Anne-Catherine Lehours
Christian Jeanthon
07/01/2015
Article
Environmental Monitoring: Inferring the Diatom Index from Next-Generation Sequencing Data
Environmental Science and Technology , 2015 , 49 (13) , pp. 7597–7605
Joana Amorim Visco
Laure Apothéloz-Perret-Gentil
Arielle Cordonier
Philippe Esling
Loïc Pillet
Jan Pawlowski
07/01/2015
Poster
Convergence/conservation of immune processes involved in the establishment of ectosymbiosis between coastal and hydrothermal annelids inhabiting extreme environment
L. Roisin
C. Papot
C. Boidin-Wichlacz
D. Jollivet
L. Lesven
V. Cuvillier-Hot
J. Mary,
S. Duperron
S. Hourdez
A. Tasiemski
06/15/2015
Article
Comparative analysis of symbiont ratios and gene expression in natural populations of two Bathymodiolus mussel species
Symbiosis , 2015 , 63 (1) , pp. 19-29
H. Guezi
Isabelle Boutet
Ann C. Andersen
F. Lallier
Arnaud Tanguy
06/01/2015
Article
Significance of Plankton Community Structure and Nutrient Availability for the Control of Dinoflagellate Blooms by Parasites: A Modeling Approach
PLoS ONE , 2015 , 10 (6) , pp. e0127623
Catharina Alves-De-Souza
David Pecqueur
Emilie Le Floc'H
Sébastien Mas
Cécile Roques
Behzad Mostajir
Franscesca Vidussi
Lourdes Velo-Suárez
Marc Sourisseau
Eric Fouilland
et al.
05/25/2015
Article
The Observatory on LAkes (OLA) database: Sixty years of environmental data accessible to the public
Annales de Limnologie - International Journal of Limnology , 2015
Frédéric Rimet
Orlane Anneville
Denis Barbet
Cécile Chardon
Laura Crepin
Isabelle Domaizon
Jean-Marcel Dorioz
Laurent Espinat
Victor Frossard
Jean Guillard
et al.
05/21/2015
Article
Environmental characteristics of Agulhas rings affect interocean plankton transport
Science , 2015 , 348 (6237) , pp. 1261447 - 1261447
Emilie Villar
Gregory Farrant
Michael Follows
Laurence Garczarek
Sabrina Speich
Stéphane Audic
Lucie Bittner
Bruno Blanke
Jennifer R. Brum
Christophe Brunet
et al.
05/21/2015
Article
Patterns and ecological drivers of ocean viral communities
Science , 2015 , 348 (6237) , pp. 1261498
Jennifer Brum
J Cesar Ignacio-Espinoza
Simon Roux
Guilhem Doulcier
Silvia G. Acinas
Adriana A. Alberti
Samuel Chaffron
Corinne Cruaud
Colomban de Vargas
Josep Gasol
et al.
05/01/2015
Article
Metabolic responses to temperature stress under elevated pCO2 in Crepidula fornicata
Journal of Molluscan Studies , 2015 , 81 (2) , pp. 238-246
Fanny Noisette
Joelle Richard
Ines Le Fur
Lloyd S. Peck
Dominique Davoult
Sophie Martin
05/01/2015
Article
Photosynthetic activity and productivity of intertidal macroalgae: in situ measurements, from thallus to community scale
Aquatic Botany , 2015 , 123 , pp. 6-12
Aline Migné
Gaspard Delebecq
Dominique Davoult
Nicolas Spilmont
Dominique Menu
François Gévaert
05/01/2015
Article
Photosynthetic activity and productivity of intertidal macroalgae: in situ measurements, from thallus to community scale
Aquatic Botany , 2015 , 123 , pp. 6-12
Aline Migné
Gaspard Delebecq
Dominique Davoult
Nicolas Spilmont
Dominique Menu
François Gévaert
05/01/2015
Article
Paralytic shellfish toxin content is related to genomic sxtA4 copy number in Alexandrium minutum strains
Frontiers in Microbiology , 2015 , 6 , pp. 404
Anke Stüken
Pilar Riobó
José Franco
Kjetill S. Jakobsen
Laure Guillou
Rosa I. Figueroa
05/01/2015
Article
Structure and function of the global ocean microbiome
Science , 2015 , 348 (6237) , pp. 1261359
Shinichi Sunagawa
Luis Pedro Coelho
Samuel Chaffron
Jens Roat Kultima
Karine Labadie
Guillem Salazar
Bardya Djahanschiri
Georg Zeller
Daniel R. Mende
Adriana A. Alberti
et al.
05/01/2015
Article
Phaeocystis rex sp nov (Phaeocystales, Prymnesiophyceae): a new solitary species that produces a multilayered scale cell covering
European Journal of Phycology , 2015 , 50 (2) , pp. 207-222
Robert A. Andersen
J. Craig Bailey
Johan Decelle
Ian Probert
05/01/2015
Article
Expansion of the `Reticulosphere': Diversity of Novel Branching and Network-forming Amoebae Helps to Define Variosea (Amoebozoa)
Protist , 2015 , 166 (2) , pp. 271-295
Cédric Berney
Stefan Geisen
Jeroen van Wichelen
Frank Nitsche
Pieter Vanormelingen
Michael Bonkowski
David Bass
05/01/2015
Article
Tara Oceans studies plankton at PLANETARY SCALE
Science , 2015 , 348 (6237) , pp. 873
P. Bork
C. Bowler
Colomban de Vargas
G. Gorsky
E. Karsenti
P. Wincker
04/17/2015
Article
Investigating isotopic functional indices to reveal changes in the structure and functioning of benthic communities
Functional Ecology , 2015 , 29 (10) , pp. 1350–1360
Carinne Rigolet
Éric Thiébaut
Anik Brind 'Amour
Stanislas F. Dubois
04/02/2015
Article
Diversification, Evolution and Sub-Functionalization of 70kDa Heat-Shock Proteins in Two Sister Species of Antarctic Krill: Differences in Thermal Habitats, Responses and Implications under Climate Change
PLoS ONE , 2015 , 10 (4) , pp. e0121642
Kévin Cascella
Didier Jollivet
Claire Papot
Nelly Léger
Erwan Corre
Juliette Ravaux
Melody S. Clark
Jean-Yves Toullec
04/01/2015
Article
Anthropogenic impact on macrobenthic communities and consequences for shorebirds in Northern France : a complex response
Biological Conservation , 2015 , 184 , pp. 396-404
Céline Rolet
Nicolas Spilmont
Dominique Davoult
Eric Goberville
Christophe Luczak
04/01/2015
Article
Does natural selection explain the fine scale genetic structure at the nuclear exon Glu-5 ` in blue mussels from Kerguelen?
Ecology and Evolution , 2015 , 5 (7) , pp. 1456--1473
Karin Gérard
Charlotte Roby
Nicolas Bierne
Philippe Borsa
Jean-Pierre Feral
Anne Chenuil
04/01/2015
Article
Blue-Green Algae in a “Greenhouse Century”? New Insights from Field Data on Climate Change Impacts on Cyanobacteria Abundance
Ecosystems , 2015 , 18 (3) , pp. 441-458
Orlane Anneville
Isabelle Domaizon
Onur Kerimoglu
Frédéric Rimet
Stéphan Jacquet
03/17/2015
Article
Transcriptome analyses to investigate symbiotic relationships between marine protists
Frontiers in Microbiology , 2015 , 6 , pp. 98
Sergio Balzano
Erwan Corre
Johan Decelle
Roberto Sierra
Patrick Wincker
Corinne da Silva
Julie Poulain
Jan Pawlowski
Fabrice Not
03/01/2015
Article
‘Ménage à trois’: a selfish genetic element uses a virus to propagate within Thermotogales
Applied and Environmental Microbiology , 2015 , 17 (9) , pp. 3278–3288
Julien Lossouarn
Camilla L. Nesbø
Coraline Mercier
Olga Zhaxybayeva
Milo S. Johnson
Rhianna Charchuck
Julien Farasin
Nadège Bienvenu
Anne-Claire Baudoux
Grégoire Michoud
et al.
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