Hal Archives
01/01/2017
Article
Estimating microbial populations by flow cytometry: Comparison between instruments
Limnology and Oceanography: Methods , 2017 , 14 (11) , pp. 750 - 758
Catherine Gérikas Ribeiro
Dominique Marie
Adriana Lopes dos Santos
Frederico Pereira Brandini
Daniel Vaulot
01/01/2017
Article
Dimethylated sulfur compounds in symbiotic protists: A potentially significant source for marine DMS(P)
Limnology and Oceanography , 2017 , 62 (3) , pp. 1139–1154
Andres Gutierrez-Rodriguez
Loic Pillet
Tristan Biard
Ward Said-Ahmad
Alon Amrani
Rafel Simó
Fabrice Not
01/01/2017
Article
Differential effects of silencing crustacean hyperglycemic hormone gene expression on the metabolic profiles of the muscle and hepatopancreas in the crayfish Procambarus clarkii
PLoS ONE , 2017 , 12 (2) , pp. e0172557
Wenfeng Li
Kuo-Hsun Chiu
Yi-Chun Tien
Shih-Fu Shih
Li-Jane Shih
Chien-Hsun Lee
Jean-Yves Toullec
Chi-Ying Lee
01/01/2017
Article
Identification and gene expression of multiple peptidoglycan recognition proteins (PGRPs) in the deep-sea mussel Bathymodiolus azoricus, involvement in symbiosis?
Comparative Biochemistry and Physiology - Part B: Biochemistry and Molecular Biology , 2017 , 207 , pp. 1-8
Camille Détrée
François H. Lallier
Arnaud Tanguy
Jean Mary
01/01/2017
Article
Accessing the genomic information of unculturable oceanic picoeukaryotes by combining multiple single cells
Scientific Reports , 2017 , 7 , pp. 41498
Jean-François Mangot
Ramiro Logares
Pablo Sánchez
Fran Latorre
Yoann 6 Seeleuthner
Samuel Mondy
Michael E. Sieracki
Olivier 6 Jaillon
Patrick Wincker
Colomban de Vargas
et al.
01/01/2017
Article
Temperature is a key factor in Micromonas-virus interactions
The International Society of Microbiologial Ecology Journal , 2017 , 11 (3) , pp. 601-612
David Demory
Laure Arsenieff
Nathalie Simon
Christophe Six
Fabienne Rigaut-Jalabert
Dominique Marie
Pei Ge
Estelle Bigeard
Stéphan Jacquet
Antoine Sciandra
et al.
01/01/2017
Article
A theoretical examination of environmental effects on the life cycle schedule and range limits of the invasive seaweed Undaria pinnatifida
Biological Invasions , 2017 , 19 (2) , pp. 691–702
James T. Murphy
Mark P. Johnson
Frédérique Viard
01/01/2017
Article
Bridging the gap between morphological species and molecular barcodes – Exemplified by loricate choanoflagellates
European Journal of Protistology , 2017 , 57 , pp. 26 - 37
Frank Nitsche
Helge Abuldhauge Thomsen
Daniel J. Richter
01/01/2017
Article
Improvement of phytoplankton culture isolation using single cell sorting by flow cytometry
Journal of Phycology , 2017 , 53 (2) , pp. 271–282
Dominique Marie
Florence Le Gall
Roseline Edern
Priscillia Gourvil
Daniel Vaulot
01/01/2017
Article
Development of Axial Pile Load Transfer Curves Based on Instrumented Load Tests
Journal of Geotechnical and Geoenvironmental Engineering , 2017 , 143 (1)
Cécilia Bohn
Alexandre Lopes dos Santos
Roger Frank
12/29/2016
Article
Response of benthic assemblages to multiple stressors: comparative effects of nutrient enrichment and physical disturbance
Marine Ecology Progress Series , 2016 , 562 , pp. 37 - 51
Joseph M. Kenworthy
David M. Paterson
Melanie J. Bishop
12/20/2016
Article
The annual and seasonal variability of the carbonate system in the Bay of Brest (Northwest Atlantic Shelf, 2008–2014)
Marine Chemistry , 2016 , 187 , pp. 1 - 15
Lesley A. Salt
Laurence Beaumont
Stéphane Blain
Eva Bucciarelli
E. Grossteffan
Antoine Guillot
Stéphane L'Helguen
Liliane Merlivat
M. Répécaud
L. Quéméner
et al.
12/01/2016
Article
Evidence-based green algal genomics reveals marine diversity and ancestral characteristics of land plants
BMC Genomics , 2016 , 17 (1) , pp. 267
Marijke van Baren
Charles Bachy
Emily Nahas Reistetter
Samuel Purvine
Jane Grimwood
Sebastian Sudek
Hang Yu
Camille Poirier
Thomas Deerinck
Alan Kuo
et al.
12/01/2016
Article
Marine invasions enter the genomic era: three lessons from the past, and the way forward
Current zoology , 2016 , 62 (6) , pp. 629-642
Frédérique Viard
Patrice David
John A. Darling
12/01/2016
Article
Conserved expression of vertebrate microvillar gene homologs in choanocytes of freshwater sponges
EvoDevo , 2016 , 7 (1) , pp. 13
Jesús F. Peña
Alexandre Alié
Daniel J. Richter
Lingyu Wang
Noriko Funayama
Scott A. Nichols
11/01/2016
Article
Preferential binding of a stable G3BP ribonucleoprotein complex to intron-retaining transcripts in mouse brain and modulation of their expression in the cerebellum
Journal of Neurochemistry , 2016 , 139 (3) , pp. 349-368
Sophie Martin
Nicolas Bellora
Juan González-Vallinas
Manuel Irimia
Karim Chébli
Marion de Toledo
Monika Raabe
Eduardo Eyras
Henning Urlaub
Ben Blencowe
et al.
11/01/2016
Article
Silicimonas algicola gen. nov., sp. nov., a member of the Roseobacter clade isolated from the cell surface of the marine diatom Thalassiosira delicatula
International Journal of Systematic and Evolutionary Microbiology , 2016 , 66 (11) , pp. 4580 - 4588
Klevi Crenn
Delphine Serpin
Cendrella Lepleux
Jörg Overmann
Christian Jeanthon
11/01/2016
Article
Mineralogical response of the Mediterranean crustose coralline alga <i>Lithophyllum cabiochae</i> to near-future ocean acidification and warming
Biogeosciences , 2016 , 13 (21) , pp. 5937 - 5945
Merinda C. Nash
Sophie Martin
Jean-Pierre Gattuso
10/19/2016
Chapître d'ouvrage
Microbiologie
Stéphan Jacquet
Jakob Zopfi
Helmut Brandl
Tom Curtis
Pilar Junier
10/14/2016
Article
Distinguishing contemporary hybridization from past introgression with post-genomic ancestry-informative SNPs in strongly differentiated Ciona species
Molecular Ecology , 2016 , 25 (21) , pp. 5527–5542
Sarah Bouchemousse
Cathy Liautard-Haag
Nicolas Bierne
Frédérique Viard
10/05/2016
Article
Synechococcus in the Atlantic Gateway to the Arctic Ocean
Frontiers in Marine Science , 2016 , 3
Maria Paulsen
Hugo Doré
Laurence Garczarek
Lena Seuthe
Oliver Müller
Ruth-Anne Sandaa
Gunnar Bratbak
Aud Larsen
10/01/2016
Article
Unexpectedly high bacteriochlorophyll a concentrations in neotropical tank bromeliads
Environmental Microbiology Reports , 2016 , 8 (5) , pp. 689 - 698
Anne-Catherine Lehours
Anne-Hélène Le Jeune
Jean-Pierre Aguer
Régis Céréghino
Bruno Corbara
Benoit Keraval
Céline Leroy
Fanny Perrière
Christian Jeanthon
Jean-François Carrias
09/15/2016
Article
A multi-decade record of high-quality <em>f</em>CO<sub>2</sub> data in version 3 of the Surface Ocean CO<sub>2</sub> Atlas (SOCAT)
Earth System Science Data , 2016 , 8 , pp. 383-413
Dorothee C. E. Bakker
Benjamin Pfeil
Camilla S. Landa
Nicolas Metzl
Kevin M. O'Brien
Are Olsen
Karl M. Smith
Catherine E. Cosca
Sumiko Harasawa
Stephen D. Jones
et al.
09/15/2016
Article
A multi-decade record of high-quality <em>f</em>CO<sub>2</sub> data in version 3 of the Surface Ocean CO<sub>2</sub> Atlas (SOCAT)
Earth System Science Data , 2016 , 8 , pp. 383-413
Dorothee C. E. Bakker
Benjamin Pfeil
Camilla S. Landa
Nicolas Metzl
Kevin M. O'Brien
Are Olsen
Karl M. Smith
Catherine E. Cosca
Sumiko Harasawa
Stephen D. Jones
et al.
09/01/2016
Article
Contrasting temporal variation in habitat complexity and species abundance distributions in four kelp forest strata
Hydrobiologia , 2016 , 777 (1) , pp. 33-54
Jean-Charles Leclerc
Pascal Riera
Laurent Lévêque
Dominique Davoult
09/01/2016
Article
Ecosystem services assessment and compensation costs for installing seaweed farms
Marine Policy , 2016 , 71 , pp. 157 - 165
Pedro Cabral
H. Levrel
F. Viard
Katia Frangoudes
S. Girard
P. Scemama
08/01/2016
Article
Ecological and evolutionary significance of novel protist lineages
European Journal of Protistology , 2016 , 55
Javier del Campo
Laure Guillou
Elisabeth Hehenberger
Ramiro Logares
Purificación López-García
Ramon Massana
08/01/2016
Article
Ultrastructure of Selenidium pendula, the Type Species of Archigregarines, and Phylogenetic Relations to Other Marine Apicomplexa
Protist , 2016 , 167 (4) , pp. 339-368
Joseph Schrével
Andrea Valigurová
Gérard Prensier
Aurélie Chambouvet
Isabelle Florent
Laure Guillou
07/01/2016
Article
Genetic and morphological sex identification methods reveal a male-biased sex ratio in the Ivory Gull Pagophila eburnea
Journal für Ornithologie = Journal of Ornithology , 2016 , 157 (3) , pp. 861-873
Glenn Yannic
Thomas Broquet
Hallvard Strøm
Adrian Aebischer
Christophe Dufresnes
Maria V. Gavrilo
H. Grant Gilchrist
Mark L. Mallory
R. I. Guy Morrison
Brigitte Sabard
et al.
06/28/2016
Poster
Minimal perfect hash functions in large scale bioinformatics Problem
Antoine Limasset
Camille Marchet
Pierre Peterlongo
Lucie Bittner
06/06/2016
Article
Historical records from dated sediment cores reveal the multidecadal dynamic of the toxic dinoflagellate Alexandrium minutum in the Bay of Brest (France)
FEMS Microbiology Ecology , 2016 , 92 (7) , pp. fiw101
Khadidja Klouch
Sabine Schmidt
Françoise Andrieux-Loyer
Mickaël Le Gac
Dominique Hervio-Heath
Zujaila Qui-Minet
Julien Quéré
Estelle Bigeard
Laure Guillou
Raffaele Siano
06/05/2016
Article
Population dynamics of the brown alga Himanthalia elongata under harvesting pressure
Estuarine, Coastal and Shelf Science , 2016 , 174 , pp. 65-70
Doriane Stagnol
Renaud Michel
Dominique Davoult
06/02/2016
Poster
Criblage, identification et mise en œuvre de polysaccharides de microalgues comme agents biologiques et hydrocolloïdes.
Clément Gaignard
Guillaume Pierre
Cédric Delattre
Ian Probert
Céline Laroche
Philippe Michaud
06/01/2016
Article
The symbiotic life of Symbiodinium in the open ocean within a new species of calcifying ciliate (Tiarina sp.)
The International Society of Microbiologial Ecology Journal , 2016 , 10 (6) , pp. 1424-1436
Solenn Mordret
Sarah Romac
Nicolas Henry
Sebastien Colin
Margaux Carmichael
Cédric Berney
Stéphane Audic
Daniel J Richter
Xavier Pochon
Colomban de Vargas
et al.
06/01/2016
Article
A new phylogeny and environmental DNA insight into paramyxids: an increasingly important but enigmatic clade of protistan parasites of marine invertebrates
International Journal for Parasitology , 2016 , 46 (10) , pp. 605-619
Georgia M. Ward
Martyn Bennett
Kelly Bateman
Grant D. Stentiford
Rose Kerr
Stephen W. Feist
Suzanne T. Williams
Cedric Berney
David Bass
06/01/2016
Article
Abundance and recruitment data for Undaria pinnatifida in Brest harbour, France: Model versus field results
Data in Brief , 2016 , 7 , pp. 540-545
James T. Murphy
Marie Voisin
Mark Johnson
Frédérique Viard
05/28/2016
Article
Status, trends and drivers of kelp forests in Europe: an expert assessment
Biodiversity and Conservation , 2016 , 25 , pp. 1319–1348
R. M. Araujo
Jorge Assis
R. Aguillar
Laura Airoldi
I. Barbara
I. Bartsch
T. Bekkby
H. Christie
Dominique Davoult
S. Derrien-Courtel
et al.
05/25/2016
Article
A multi-decade record of high-quality fCO<sub>2</sub> data in version 3 of the Surface Ocean CO<sub>2</sub> Atlas (SOCAT)
Earth System Science Data : Papers in open discussion , 2016 , pp. 1 - 55
Dorothee C. E. Bakker
Benjamin Pfeil
Camilla S. Landa
Nicolas Metzl
Kevin M. O'Brien
Are Olsen
Karl M. Smith
Catherine E. Cosca
Sumiko Harasawa
Stephen D. Jones
et al.
05/01/2016
Article
The internal consistency of the North Sea carbonate system
Journal of Marine Systems , 2016 , 157 , pp. 52–64
Lesley A. Salt
Helmuth Thomas
Yann Bozec
Alberto V. Borges
Hein J.W. de Baar
05/01/2016
Rapport
Assessing benthic habitats' sensitivity to human pressures: a methodological framework
, 2016 , pp. 42 pages
Marie La Rivière
Annabelle Aish
Olivier Gauthier
Jacques Grall
Laurent Guérin
Anne-Laure Janson
Céline Labrune
Thierry Thibaut
Eric Thiébaut
03/01/2016
Article
Global distribution and vertical patterns of a prymnesiophyte–cyanobacteria obligate symbiosis
The International Society of Microbiologial Ecology Journal , 2016 , 10 (3) , pp. 693-706
Ana M Cabello
Francisco M Cornejo-Castillo
Nicolas Raho
Dolors Blasco
Montserrat Vidal
Stéphane Audic
Colomban de Vargas
Mikel Latasa
Silvia G Acinas
Ramon Massana
03/01/2016
Poster
From seascape to habitat functioning: An ecosystem based approach to assess the status of Mediterranean micro-estuaries.
Jean-Laurent Massey
Vanina Pasqualini
Yoann Baldi
Béatrice Bec
Valérie Derolez
Annie Fiandrino
Marie Garrido
Valérie Orsoni
Patrick Rébillout
Vincent Ouisse
et al.
03/01/2016
Article
Peripheral communities of the Eastern Lau Spreading Center and Valu Fa Ridge: community composition, temporal change and comparison to near-vent communities
Marine Ecology , 2016 , 37 (3) , pp. 599–617
Arunima Sen
Stacy Kim
Alex J. Miller
Kyle J. Hovey
Stéphane Hourdez
George W. Luther Iii
Charles R. Fisher
03/01/2016
Article
Diversity and oceanic distribution of the Parmales (Bolidophyceae), a picoplanktonic group closely related to diatoms
The International Society of Microbiologial Ecology Journal , 2016 , 10 , pp. 2419–2434
Mutsuo Ichinomiya
Adriana Lopes dos Santos
Priscillia Gourvil
Shinya Yoshikawa
Mitsunobu Kamiya
Kaori Ohki
Stéphane Audic
Colomban de Vargas
Mary-Hélène Noël
Daniel Vaulot
et al.
03/01/2016
Article
Correlation between long-term marine temperature time series from the eastern and western English Channel: Scaling analysis using empirical mode decomposition
Comptes Rendus Géoscience , 2016 , 348 (5) , pp. 343-349
Jonathan Derot
François G Schmitt
Valérie Gentilhomme
Pascal Morin
02/24/2016
Article
Transcriptomic profiling of Alexandrium fundyense during physical interaction with or exposure to chemical signals from the parasite Amoebophrya
Molecular Ecology , 2016 , 25 (6) , pp. 1294-1307
Yameng Lu
Sylke Wohlrab
Marco Groth
Gernot Glöckner
Laure Guillou
Uwe John
02/10/2016
Article
Paradoxical effects of temperature and solar irradiance on the photodegradation state of killed phytoplankton
Journal of Phycology , 2016 , 52 (3) , pp. 475–485
Remi Amiraux
Christian Jeanthon
Frédéric Vaultier
Jean-Francois Rontani
02/01/2016
Article
Global patterns of pelagic dinoflagellate diversity across protist size classes unveiled by metabarcoding
Environmental Microbiology , 2016 , 18 (2) , pp. 609-626
Noan Le Bescot
Frédéric Mahé
Stéphane Audic
Céline Dimier
Marie-Jose Garet
Julie Poulain
Patrick Wincker
Colomban De Vargas
Raffaele Siano
02/01/2016
Article
Plankton networks driving carbon export in the oligotrophic ocean
Nature , 2016 , 532 , pp. 465–470
Lionel Guidi
Samuel Chaffron
Lucie Bittner
Damien Eveillard
Abdelhalim Larhlimi
Simon Roux
Youssef Darzi
Stéphane Audic
L. Berline
Jennifer R. Brum
et al.
02/01/2016
Article
Divergent ecological histories of two sister Antarctic krill species led to contrasted patterns of genetic diversity in their heat-shock protein (hsp70) arsenal
Ecology and Evolution , 2016 , 6 (5) , pp. 1555–1575
Claire Papot
Kévin Cascella
Jean-Yves Toullec
Didier Jollivet
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