Publications
Water mass specific genes dominate the Southern Ocean microbiome
Emile Faure, Jolann Pommellec, Cyril Noel, Alexandre Cormier, Lisa-Marie Delpech, et al.. Water mass specific genes dominate the Southern Ocean microbiome. Nature Communications, 2026, 17 (1), 2025 (16p.). ⟨10.1038/s41467-026-69584-w⟩. ⟨hal-05587158⟩
Integrating metagenome-scale metabolic modelling and metabolomics to identify biochemical interactions in Microcystis phycospheres
Juliette Audemard, Nicolas Creusot, Julie Leloup, Charlotte Duval, Sébastien Halary, et al.. Integrating metagenome-scale metabolic modelling and metabolomics to identify biochemical interactions in Microcystis phycospheres. 2026. ⟨hal-05593509⟩
A holistic perspective on planktonic communities across the Northwestern Mediterranean Sea
Magali Lescot, Nolan Lezzoche, Louise Laux, Sarah Romac, Loïc Guilloux, et al.. A holistic perspective on planktonic communities across the Northwestern Mediterranean Sea. Frontiers in Marine Science, 2026, 13, pp.1755855. ⟨10.3389/fmars.2026.1755855⟩. ⟨hal-05594720⟩
Wood substrate identity shapes isotopic composition and growth performance in a shipworm (Bivalvia: Teredinidae)
François Charles, Pascal Riera, Benoit Lebreton, Gaël Guillou, Fabien Aubert, et al.. Wood substrate identity shapes isotopic composition and growth performance in a shipworm (Bivalvia: Teredinidae). 2026. ⟨hal-05598598⟩
Coral microbiomes as reservoirs of unknown genomic and biosynthetic diversity
Fabienne Wiederkehr, Lucas Paoli, Daniel Richter, Dora Racunica, Hans-Joachim Ruscheweyh, et al.. Coral microbiomes as reservoirs of unknown genomic and biosynthetic diversity. Nature, 2026, 652 (8110), pp.686-693. ⟨10.1038/s41586-026-10159-6⟩. ⟨hal-05607741⟩
Ten common misconceptions about Galaxy (and why they are wrong!)
Wendi Anne Bacon, Bérénice Batut, Sanjay Kumar Srikakulam, Paul Zierep, Anthony Bretaudeau, et al.. Ten common misconceptions about Galaxy (and why they are wrong!). PLoS Computational Biology, 2026, 22 (2), pp.e1013869. ⟨10.1371/journal.pcbi.1013869⟩. ⟨hal-05563178⟩
Complex temporal dynamics of phage-bacteria populations in an animal-associated marine system
Jeffrey Liang, Karine Cahier, Damien Piel, Dario Cueva Granda, David Goudenège, et al.. Complex temporal dynamics of phage-bacteria populations in an animal-associated marine system. Nature Communications, In press, ⟨10.1038/s41467-026-71398-9⟩. ⟨hal-05613932⟩
Author Correction: Membrane remodelling mediates lipopeptide-induced immunity in Arabidopsis
Guillaume Gilliard, Jelena Pršić, Jean-Marc Crowet, Catherine Chemotti, Jahed Ahmed, et al.. Author Correction: Membrane remodelling mediates lipopeptide-induced immunity in Arabidopsis. Nature Plants, 2026, ⟨10.1038/s41477-026-02308-6⟩. ⟨hal-05616292⟩
Assessing phytoplankton community composition using in-situ multispectral excitation fluorescence and potential for application to BGC-Argo profiling floats
Flavien Petit, Julia Uitz, Louison Dufour, Collin Roesler, Frédéric Partensky, et al.. Assessing phytoplankton community composition using in-situ multispectral excitation fluorescence and potential for application to BGC-Argo profiling floats. EGUsphere [preprint], 2026, ⟨10.5194/egusphere-2025-6418⟩. ⟨hal-05616950⟩
OligoN‐Design: A Simple and Versatile Tool to Design Specific Probes and Primers From Large Heterogeneous Datasets
Miguel Sandin, Marie Walde, Nicolas Henry, Irene Forn, Nathalie Simon, et al.. OligoN‐Design: A Simple and Versatile Tool to Design Specific Probes and Primers From Large Heterogeneous Datasets. Molecular Ecology Resources, 2026, 26 (3), ⟨10.1111/1755-0998.70140⟩. ⟨hal-05616953⟩
Interplay between high‐energy quenching and state transitions in Chlamydomonas reinhardtii : a single‐cell approach
Aliénor Lahlou, Marcelo Orlando, Sandrine Bujaldon, William Gaultier, Eliora Israelievitch, et al.. Interplay between high‐energy quenching and state transitions in Chlamydomonas reinhardtii : a single‐cell approach. New Phytologist, 2026, 250 (4), pp.2689-2705. ⟨10.1111/nph.71001⟩. ⟨hal-05616957⟩
Environmental structuring of mixoplankton functional types within marine protist communities: a global analysis
Michaela Larsson, Suzana Leles, Aditee Mitra, Emile Faure, Daniel Vaulot, et al.. Environmental structuring of mixoplankton functional types within marine protist communities: a global analysis. Ocean Microbiology, 2026, 2 (1), pp.1. ⟨10.1186/s44375-026-00007-3⟩. ⟨hal-05616967⟩