Hal Archives
01/01/2021
Article
The Epistemic Revolution Induced by Microbiome Studies: An Interdisciplinary View
Biology , 2021 , 10 (7) , pp. 651
Eric Bapteste
Philippe Gerard
Catherine Larose
Manuel Blouin
Fabrice Not
Liliane Campos
Géraldine Aïdan
M. André André Selosse
M. Sarah Sarah Adénis
Frédéric Bouchard
et al.
01/01/2021
Preprint, Working Paper
Age-specific survivorship and fecundity shape genetic diversity in marine fishes
Pierre Barry
Thomas Broquet
Pierre-Alexandre Gagnaire
01/01/2021
Article
A thermal trade-off between viral production and degradation drives phytoplankton-virus population dynamics
Ecology Letters , 2021 , 24 (6) , pp. 1133-1144
David Demory
Joshua Weitz
A-C Baudoux
Suzanne Touzeau
Natalie Simon
Sophie Rabouille
Antoine Sciandra
Olivier Bernard
01/01/2021
Article
An 18S V4 rRNA metabarcoding dataset of protist diversity in the Atlantic inflow to the Arctic Ocean, through the year and down to 1000 m depth
Earth System Science Data , 2021 , 13 (10) , pp. 4913 - 4928
Elianne Egge
Stephanie Elferink
Daniel Vaulot
Uwe John
Gunnar Bratbak
Aud Larsen
Bente Edvardsen
01/01/2021
Article
Oceanographic structure and seasonal variation contribute to high heterogeneity in mesozooplankton over small spatial scales
ICES Journal of Marine Science , 2021
Manoela Brandão
Thierry Comtet
Patrick Pouline
Caroline Cailliau
Aline Blanchet-Aurigny
Marc Sourisseau
Raffaele Siano
Laurent Memery
Frédérique Viard
Flávia Nunes
01/01/2021
Article
Oxygen consumption rates in deep-sea hydrothermal vent scale worms: effect of lifestyle, oxygen concentration, and temperature sensitivity
Deep-sea research. Part A, Oceanographic research papers , 2021 , 172 (103531)
Victor Le Layec
Stéphane Hourdez
01/01/2021
Article
Global distribution patterns of marine nitrogen-fixers by imaging and molecular methods
Nature Communications , 2021 , 12 , pp. 4160
Juan José Pierella Karlusich
Eric Pelletier
Fabien Lombard
Madeline Carsique
Etienne Dvorak
Sébastien Colin
Marc Picheral
Francisco M Cornejo-Castillo
Silvia G Acinas
Rainer Pepperkok
et al.
01/01/2021
Article
Annual phytoplankton succession results from niche-environment interaction
Journal of Plankton Research , 2021 , 43 (1) , pp. 85-102
Mariarita Caracciolo
Gregory Beaugrand
Pierre Hélaouët
Francois Gevaert
Martin Edwards
Fabrice Lizon
Loïck Kléparski
Eric Goberville
01/01/2021
Article
An introgression breakthrough left by an anthropogenic contact between two ascidians
Molecular Ecology , 2021
Alan Le Moan
Charlotte Roby
Christelle Fraisse
Claire Daguin‐thiébaut
Nicolas Bierne
Frédérique Viard
01/01/2021
Article
A genome-wide investigation of the effect of farming and human-mediated introduction on the ubiquitous seaweed Undaria pinnatifida
Nature Ecology & Evolution , 2021 , 5 , pp. 360-368
Louis Graf
Younhee Shin
Ji Hyun Yang
Ji Won Choi
Il Ki Hwang
Wendy A Nelson
Debashish Bhattacharya
Frédérique Viard
Hwan Su Yoon
12/18/2020
Article
Dinoflagellate Host Chloroplasts and Mitochondria Remain Functional During Amoebophrya Infection
Frontiers in Microbiology , 2020 , 11 , pp. 600823
Ehsan Kayal
Catharina Alves-De-Souza
Sarah Farhat
Lourdes Velo-Suarez
Joanne Monjol
Jeremy Szymczak
Estelle Bigeard
Dominique Marie
Benjamin Noel
Betina M Porcel
et al.
12/13/2020
Article
Seascape Genomics of the Sugar Kelp Saccharina latissima Along the North Eastern Atlantic Latitudinal Gradient
Genes , 2020 , 11 (12) , pp. 1503
Jaromir Guzinski
Paolo Ruggeri
Marion Ballenghien
Stéphane Mauger
Bertrand Jacquemin
Chloe Jollivet
Jérôme Coudret
Lucie Jaugeon
Christophe Destombe
Myriam Valero
12/02/2020
Comm. dans un congrès
Primal-dual splitting scheme with backtracking for handling with epigraphic constraint and sparse analysis regularization
Laurence Denneulin
Nelly Pustelnik
M Langlois
Ignace Loris
Eric Thiébaut
12/01/2020
Article
Globins in the marine annelid Platynereis dumerilii shed new light on hemoglobin evolution in bilaterians
BMC Evolutionary Biology , 2020 , 20 (1)
Solène Song
Viktor Starunov
Xavier Bailly
Christine Ruta
Pierre Kerner
Annemiek J M Cornelissen
Guillaume Balavoine
12/01/2020
Article
Disentangling the mechanisms shaping the surface ocean microbiota
Microbiome , 2020 , 8 (1)
Ramiro Logares
Ina M Deutschmann
Pedro C Junger
Caterina R Giner
Anders K Krabberød
Thomas Schmidt
Laura Rubinat-Ripoll
Mireia Mestre
Guillem Salazar
Clara Ruiz-González
et al.
12/01/2020
Article
Classical and computed tomographic anatomical analyses in a not-so-cryptic Alviniconcha species complex from hydrothermal vents in the SW Pacific
Frontiers in Zoology , 2020 , 17 (1)
Sven Laming
Stéphane Hourdez
Marie-Anne Cambon-Bonavita
Florence Pradillon
11/01/2020
Article
Identification of variants associated with hard clam, Mercenaria mercenaria, resistance to Quahog Parasite Unknown disease
Genomics , 2020 , 112 (6) , pp. 4887-4896
Sarah Farhat
Arnaud Tanguy
Emmanuelle Pales Espinosa
Ximing Guo
Isabelle Boutet
Roxanna Smolowitz
Diane Murphy
Gregg Rivara
Bassem Allam
10/01/2020
Article
Refractory Auto-Immune Thrombotic Thrombocytopenic Pupura Successfully Treated With Caplacizumab
Frontiers in Medicine , 2020 , 7
Chloé Mellaza
Nicolas Henry
Pierre-Marie Fayolle
Satar Mortaza
Jean-François Subra
Agnès Veyradier
Paul Coppo
Jean-François Augusto
10/01/2020
Article
Long-term spatio-temporal changes of the muddy fine sand benthic community of the Bay of Seine (eastern English Channel)
Marine Environmental Research , 2020 , 161 , pp. 105062
Lise Bacouillard
Noémie Baux
Jean-Claude Dauvin
Nicolas Desroy
Katja Juliana Geiger
Franck Gentil
Eric Thiébaut
10/01/2020
Article
Using stable isotope analysis to determine the effects of ocean acidification and warming on trophic interactions in a maerl bed community
Marine Ecology , 2020 , 41 (5)
Erwann Legrand
Sophie Martin
Cédric Leroux
Pascal Riera
10/01/2020
Article
The Crustacean Hyperglycemic Hormone Superfamily: Progress Made in the Past Decade
Frontiers in Endocrinology , 2020 , 11 , pp. 578958
Hsiang-Yin Chen
Jean-Yves Toullec
Chi-Ying Lee
09/15/2020
Article
Evolutionary Mechanisms of Long-Term Genome Diversification Associated With Niche Partitioning in Marine Picocyanobacteria
Frontiers in Microbiology , 2020 , 11
Hugo Doré
Gregory Farrant
Ulysse Guyet
Julie Haguait
Florian Humily
Morgane Ratin
Frances Pitt
Martin Ostrowski
Christophe Six
Loraine Brillet-Guéguen
et al.
09/07/2020
Article
Biogeography of marine giant viruses reveals their interplay with eukaryotes and ecological functions
Nature Ecology & Evolution , 2020 , 4 (12) , pp. 1639-1649
Hisashi Endo
Romain Blanc Mathieu
Yanze Li
Guillem Salazar
Nicolas Henry
Karine Labadie
Colomban de Vargas
Matthew B Sullivan
Chris C. Bowler
Patrick Wincker
et al.
09/01/2020
Article
Regionalized cell proliferation in the symbiont-bearing gill of the hydrothermal vent mussel Bathymodiolus azoricus
Symbiosis , 2020
Bérénice Piquet
François Lallier
Coralie André
Bruce Shillito
Ann Andersen
Sébastien Duperron
08/31/2020
Article
Cardinal Buoys: An Opportunity for the Study of Air-Sea CO 2 Fluxes in Coastal Ecosystems
Frontiers in Marine Science , 2020 , 7
Jean-Philippe Gac
Pierre Marrec
Thierry Cariou
Christophe Guillerm
Éric Macé
Marc Vernet
Yann Bozec
08/31/2020
Article
The evolution of strong reproductive isolation between sympatric intertidal snails
Philosophical Transactions of the Royal Society B: Biological Sciences , 2020 , 375 (1806) , pp. 20190545
Sean Stankowski
Anja Westram
Zuzanna Zagrodzka
Isobel Eyres
Thomas Broquet
Kerstin Johannesson
Roger Butlin
08/01/2020
Article
Looks can be deceiving: Didemnum pseudovexillum sp. nov. (Ascidiacea) in European harbours
Marine Biodiversity , 2020 , 50 (4) , pp. 48
Xavier Turon
Maria Casso
Marta Pascual
Frédérique Viard
08/01/2020
Article
New 16S rRNA primers to uncover Bdellovibrio and like organisms diversity and abundance
Journal of Microbiological Methods , 2020 , 175 , pp. 105996
Jade Ezzedine
Cécile Chardon
Stéphan Jacquet
07/24/2020
Article
Synergic Effects of Temperature and Irradiance on the Physiology of the Marine Synechococcus Strain WH7803
Frontiers in Microbiology , 2020 , 11
Ulysse Guyet
Ngoc Thanh Nguyen
Hugo Doré
Julie Haguait
Justine Pittera
Maël Conan
Morgane Ratin
Erwan Corre
Gildas Le Corguillé
Loraine A Brillet-Guéguen
et al.
07/10/2020
Article
Biological rhythms in the deep-sea hydrothermal mussel Bathymodiolus azoricus
Nature Communications , 2020 , 11 (1)
Audrey Mat
Jozée Sarrazin
Gabriel Markov
Vincent Apremont
Christine Dubreuil
Camille Eché
Caroline Fabioux
Christophe C. Klopp
Pierre-Marie Sarradin
Arnaud Tanguy
et al.
07/01/2020
Article
Citizen participation in monitoring phytoplankton seawater discolorations
Marine Policy , 2020 , 117 , pp. 103039
R. Siano
A. Chapelle
V. Antoine
Elisabeth Guillou
F. Rigaut-Jalabert
Laure Guillou
Helene Hegaret
Aude Leynaert
A. Curd
07/01/2020
Article
Improvement in adherence to Capecitabine and Lapatinib by way of a therapeutic education program
Supportive Care in Cancer , 2020 , 28 (7) , pp. 3313-3322
Laure Vacher
Emilie E. Thivat
Camille Poirier
Marie-Ange Mouret-Reynier
Philippe Chollet
Hervé Devaud
Pascale Dubray-Longeras
Fabrice Kwiatkowski
Xavier Durando
Isabelle van Praagh-Doreau
et al.
07/01/2020
Article
The first head-tailed virus, MFTV1, produced by a hyperthermophilic methanogenic deep-sea archaea
Environmental Microbiology , 2020 , 23 (7) , pp. 3614-3626
Sarah Thiroux
Samuel Dupont
Camilla L. Nesbø
Nadège Bienvenu
Mart Krupovic
Stéphane L'Haridon
Dominique Marie
Patrick Forterre
Anne Godfroy
Claire Geslin
06/25/2020
Article
The Importance of Protein Size in Protein-Nanoparticle Interactions: From Protein Corona to Colloidal Self-Assembly
Langmuir , 2020
Laurent Marichal
Jéril Degrouard
Anouchka Gatin
Nolwenn Raffray
Jean-Christophe Aude
Yves Boulard
Sophie Combet
Fabrice Cousin
Stéphane Hourdez
Jean Mary
et al.
06/25/2020
Article
From Protein Corona to Colloidal Self-Assembly: The Importance of Protein Size in Protein-Nanoparticle Interactions
Langmuir , 2020 , 36 , pp. 8218-8230
Laurent Marichal
Jéril Degrouard
Anouchka Gatin
Nolwenn Raffray
Jean-Christophe Aude
Yves Boulard
Sophie Combet
Fabrice Cousin
Stéphane Hourdez
Jean Mary
et al.
05/29/2020
Article
An integrative taxonomic framework for the study of the genus Ciona (Ascidiacea) and description of a new species, Ciona intermedia
Zoological Journal of the Linnean Society , 2020
Francesco Mastrototaro
Federica Montesanto
Marika Salonna
Frédérique Viard
Giovanni Chimienti
Egidio Trainito
Carmela Gissi
05/12/2020
Article
Tara Oceans: towards global ocean ecosystems biology
Nature Reviews Microbiology , 2020 , 18 , pp. 428–445
Shinichi Sunagawa
Silvia G. Acinas
Peer Bork
Chris Bowler
Damien Eveillard
Gabriel Gorsky
Lionel Guidi
Daniele Iudicone
Eric Karsenti
Fabien Lombard
et al.
05/12/2020
Article
Hungry scale worms: Phylogenetics of Peinaleopolynoe (Polynoidae, Annelida), with four new species
Zookeys , 2020 , 932 , pp. 27-74
Avery Hatch
Haebin Liew
Stéphane Hourdez
Greg Rouse
05/03/2020
Poster
Responses of sympatric dreissenid species to contamination: comparison of zebra mussel and quagga mussel exposed to cadmium, and consequences for ecotoxicological studies
Elise David
Michel Auffret
Marc Bonnard
Bultelle Florence
Odile Dedourge-Geffard
Laurence Delahaut
Simon Devin
Morgane Lebreton
Fanny Louis
Béatrice Rocher
et al.
04/28/2020
Article
Oyster hemolymph is a complex and dynamic ecosystem hosting bacteria, protists and viruses
Animal Microbiome , 2020 , 2 (1) , pp. 12
Samuel Dupont
A. Lokmer
E. Corre
J.-C. Auguet
Bruno Petton
E. Toulza
C. Montagnani
G. Tanguy
D. Pecqueur
C. Salmeron
et al.
04/01/2020
Article
Diversity and dynamics of relevant nanoplanktonic diatoms in the Western English Channel
ISME Journal , 2020 , 14 (8) , pp. 1966-1981
Laure Arsenieff
Florence Le Gall
Fabienne Rigaut-Jalabert
Frédéric Mahé
Diana Sarno
Léna Gouhier
Anne-Claire Baudoux
Nathalie Simon
04/01/2020
Article
A review of the potential genes implicated in follicular atresia in teleost fish
Marine Genomics , 2020 , 50 , pp. 100704
Paola González-Kother
Marcelo E. Oliva
Arnaud Tanguy
Dario Moraga
03/01/2020
Article
An integrated investigation of the effects of ocean acidification on adult abalone (Haliotis tuberculata)
ICES Journal of Marine Science , 2020 , 77 (2) , pp. 757-772
Solène Avignon
Stéphanie Auzoux-Bordenave
Sophie Martin
Philippe Dubois
Aïcha Badou
Manon Coheleach
Nicolas Richard
Sarah Di Giglio
Loic Malet
Arianna Servili
et al.
02/23/2020
Article
Widespread microbial mercury methylation genes in the global ocean
Environmental Microbiology Reports , 2020
Emilie Villar
Lea Cabrol
Lars-Eric Heimbürger
02/14/2020
Article
Bdellovibrio and Like Organisms in Lake Geneva: An Unseen Elephant in the Room?
Frontiers in Microbiology , 2020 , 11
Jade Ezzedine
Louis Jacas
Yves Desdevises
Stéphan Jacquet
02/03/2020
Preprint, Working Paper
Cryptic species in the parasitic Amoebophrya species complex revealed by a polyphasic approach
Ruibo Cai
Ehsan Kayal
Catharina Alves-De-Souza
Estelle Bigeard
Erwan Corre
Christian Jeanthon
Dominique Marie
Betina M Porcel
Raffaele Siano
Jeremy Szymczak
et al.
02/01/2020
Article
Trophic niche partitioning in marine wood-borers revealed by stable isotope analysis
Aquatic Biology , 2020 , 29 , pp. 33-43
François Charles
Pascal Riera
Pierre-Guy Sauriau
François Lantoine
Benoit Lebreton
Hélène Agogué
Stéphane Hourdez
01/27/2020
Article
Green Edge ice camp campaigns: understanding the processes controlling the under-ice Arctic phytoplankton spring bloom
Earth System Science Data : Papers in open discussion , 2020 , 12 (1) , pp. 151–176
Philippe Massicotte
Rémi Amiraux
Marie-Pier Amyot
Philippe Archambault
Mathieu Ardyna
Laurent Arnaud
Lise Artigue
Cyril Aubry
Pierre Ayotte
Guislain Bécu
et al.
01/14/2020
Article
Citizen Science, a promising tool for detecting and monitoring outbreaks of the crown-of-thorns starfish Acanthaster spp.
Scientific Reports , 2020 , 10 (291)
Pascal Dumas
Fiat Sylvie
Amaury Durbano
Christophe Peignon
Gérard Mou-Tham
Jayven Ham
Sompert Gereva
Rocky Kaku
Olivier Chateau
Laurent Wantiez
et al.
01/01/2020
Article
Antarctic krill (Euphausia superba) in a warming ocean: thermotolerance and deciphering Hsp70 responses
Cell Stress and Chaperones , 2020 , 25 (3) , pp. 519-531
Jean-Yves Toullec
Kévin Cascella
Stéphanie Ruault
Alexandre Geffroy
David Lorieux
Nicolas Montagné
Céline Ollivaux
Chi-Ying Lee
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