Hal Archives
06/30/2023
Article
Eukaryotic algal community composition in tropical environments from solar salterns to the open sea
Frontiers in Marine Science , 2023 , 10
Charlotte Eckmann
Jessica Eberle
Fabian Wittmers
Susanne Wilken
Kristin Bergauer
Camille Poirier
Marguerite Blum
Kriste Makareviciute-Fichtner
Valeria Jimenez
Charles Bachy
et al.
06/27/2023
Article
Transcriptional Mechanisms of Thermal Acclimation in Prochlorococcus
mBio , 2023 , 14 (3)
Laura Alonso-Sáez
Antonio Palacio
Ana Cabello
Semidán Robaina-Estévez
José González
Laurence Garczarek
Ángel López-Urrutia
06/25/2023
Article
The diversification of the antimicrobial peptides from marine worms is driven by environmental conditions
Science of the Total Environment , 2023 , 879 , pp. 162875
Renato Bruno
Céline Boidin-Wichlacz
Oleg Melnyk
Daniela Zeppilli
Celine Landon
Frédéric Thomas
Marie-Anne Cambon-Bonavita
Mickaël Lafond
Kamel Mabrouk
François Massol
et al.
06/08/2023
Article
Management and conservation implications of cryptic population substructure for two commercially exploited fishes ( Merluccius spp.) in southern Africa
Molecular Ecology Resources , 2023
Sarah Forde
Sophie von der Heyden
Alan Le Moan
Erica Nielsen
Deon Durholtz
Paulus Kainge
Johannes Kathena
Marek Lipinski
Hilkka Ndjaula
Conrad Matthee
et al.
06/05/2023
Comm. dans un congrès
Functional trait-based approaches as a common framework for aquatic ecologists : Synthesis and recent results.
, 2023 , 66 (3) , pp. 965-994
Séverine Martini
Floriane Larras
Aurélien Boyé
Emile Faure
Nicole Aberle
Philippe Archambault
Lise Bacouillard
Beatrix E Beisner
Lucie Bittner
Emmanuel Castella
et al.
06/01/2023
Article
Effects of monsoons and storms on the structuring and diversity of picoeukaryotic microbial communities in a tropical coastal environment
Deep Sea Research Part II: Topical Studies in Oceanography , 2023 , 209 , pp. 105294
Maria Anna Michaela de la Cruz
Brian William Hingpit
Laure Guillou
Deo Florence L. Onda
06/01/2023
Article
Bacterial symbiont diversity in Arctic seep Oligobrachia siboglinids
Animal Microbiome , 2023 , 5 (1) , pp. 30
Arunima Sen
Gwenn Tanguy
Pierre E Galand
Ann C Andersen
Stephane Hourdez
05/26/2023
Article
Natural iron fertilization by shallow hydrothermal sources fuels diazotroph blooms in the ocean
Science , 2023 , 380 (6647) , pp. 812-817
Sophie Bonnet
Cécile Guieu
Vincent Taillandier
Cédric Boulart
Pascale Bouruet-Aubertot
Frédéric Gazeau
Carla Scalabrin
Matthieu Bressac
Angela Knapp
Yannis Cuypers
et al.
05/18/2023
Article
European marine omics biodiversity observation network: a strategic outline for the implementation of omics approaches in ocean observation
Frontiers in Marine Science , 2023 , 10
Ioulia Santi
Odette Beluche
Mélanie Beraud
Pier Luigi Buttigieg
Raffaella Casotti
Cymon Cox
Michael Cunliffe
Neil Davies
Oihane Diaz de Cerio
Katrina Exter
et al.
04/26/2023
Article
Data quality control considerations in multivariate environmental monitoring: experience of the French coastal network SOMLIT
Frontiers in Marine Science , 2023 , 10 , pp. 12
Elsa Breton
Nicolas Savoye
Peggy Rimmelin-Maury
Benoit Sautour
Eric Goberville
Arnaud Lheureux
Thierry Cariou
Sophie Ferreira
Hélène Agogué
Samir Alliouane
et al.
04/16/2023
Article
The Mixoplankton Database (MDB): Diversity of photo‐phago‐trophic plankton in form, function, and distribution across the global ocean
Journal of Eukaryotic Microbiology , 2023 , 70 (4)
Aditee Mitra
David Caron
Emile Faure
Kevin Flynn
Suzana Gonçalves Leles
Per Hansen
George Mcmanus
Fabrice Not
Helga Do Rosario Gomes
Luciana Santoferrara
et al.
04/13/2023
Preprint, Working Paper
Genetic sex determination in three closely related hydrothermal vent gastropods, including one species with intersex individuals
J Castel
F Pradillon
V Cueff
G Leger
C Daguin-Thiébaut
S Ruault
J Mary
S Hourdez
D Jollivet
T. Broquet
04/12/2023
Article
Coupling large-spatial scale larval dispersal modelling with barcoding to refine the amphi-Atlantic connectivity hypothesis in deep-sea seep mussels
Frontiers in Marine Science , 2023 , 10 , pp. 1122124
Elodie Portanier
Amandine Nicolle
Willi Rath
Lorraine Monnet
Gregoire Le Goff
Anne-Sophie Le Port
Claire Daguin-Thiébaut
Cheryl L Morrison
Marina R Cunha
Melissa Betters
et al.
03/20/2023
Comm. dans un congrès
Le jardin mahorais : des espaces agroforestiers complexes et multifonctionnels
, 2023 , pp. 13 p.
Joël Huat
Clara Husson
Magali Aubert
Isaure Combeuil
Clémentine Couderc
Philippe Ryckewaert
Elayis Quenee
Grégoire Savourey
Manrifa Moustoifa-Ali
C. Coorevits
et al.
03/01/2023
Article
Parvilucifera rostrata
Trends in Parasitology , 2023 , 39 (3) , pp. 227-228
Catharina Alves-De-Souza
Laure Guillou
02/08/2023
Article
Viral infection impacts the 3D subcellular structure of the abundant marine diatom Guinardia delicatula
Frontiers in Marine Science , 2023 , 9
Marie Walde
Cyprien Camplong
Colomban de Vargas
Anne-Claire Baudoux
Nathalie Simon
02/03/2023
Preprint, Working Paper
Morpho-molecular diversity and evolutionary analyses suggest hidden life styles in Spumellaria (Radiolaria)
Miguel Sandin
Tristan Biard
Sarah Romac
Luis O’dogherty
Noritoshi Suzuki
Fabrice Not
02/03/2023
Preprint, Working Paper
PlanktonScope: Affordable modular imaging platform for citizen oceanography
Thibaut Pollina
Adam Larson
Fabien Lombard
Hongquan Li
Sebastien Colin
Colomban de Vargas
Manu Prakash
02/03/2023
Preprint, Working Paper
Unveiling hidden eukaryotes: diversity of Endomyxa (Rhizaria) in coastal marine habitats
Cédric Berney
Stefan Ciaghi
Sarah Romac
Frédéric Mahé
Colomban de Vargas
Olivier Jaillon
Martin Kirchmair
David Bass
Sigrid Neuhauser
02/03/2023
Preprint, Working Paper
No evidence of phago-mixotropy in Micromonas polaris , the dominant picophytoplankton species in the Arctic
Valeria Jimenez
John Burns
Florence Le Gall
Fabrice Not
Daniel Vaulot
02/01/2023
Article
Evaluation of Sub-Antarctic and Antarctic sea urchins’ thermal reaction norm through righting behavior and comparison with in situ measurements
Journal of Thermal Biology , 2023 , 112 , pp. 103496
Camille Détrée
Jorge Navarro
Ignacio Garrido
Paulina Bruning
Jean-Charles Leclerc
01/18/2023
Article
Single-cell metabolome profiling for phenotyping parasitic diseases in phytoplankton
Frontiers in Analytical Science , 2023 , 2
Marin Vallet
Filip Kaftan
Anthony Buaya
Marco Thines
Laure Guillou
Aleš Svatoš
Georg Pohnert
01/02/2023
Ouvrage
Les virus marins: Simples parasites ou acteurs majeurs des écosystèmes aquatiques?
A-C Baudoux
Stéphan Jacquet
Yves Desdevises
Soizick Le Guyader
01/01/2023
Article
Predicting global distributions of eukaryotic plankton communities from satellite data
ISME Communications , 2023 , 3 (1) , pp. 101
Hiroto Kaneko
Hisashi Endo
Nicolas Henry
Cédric Berney
Frédéric Mahé
Julie Poulain
Karine Labadie
Odette Beluche
Roy El Hourany
Silvia Acinas
et al.
01/01/2023
Article
Structural Study of the Cobetia marina Bacteriophage 1 (Carin-1) by Cryo-EM
Journal of Virology , 2023 , 97 (4) , pp. 00248-23
Alessio D’acapito
Thomas Roret
Eleftherios Zarkadas
Pierre-Yves Mocaër
Florian Lelchat
Anne-Claire Baudoux
Guy Schoehn
Emmanuelle Neumann
01/01/2023
Article
Phylogenetic divergence and population genetics of the hydrothermal vent annelid genus Hesiolyra along the East Pacific Rise: Reappraisal using multi‐locus data
Diversity and Distributions , 2023 , 29 (1) , pp. 184-198
Leyi Xi
Yanan Sun
Ting Xu
Zhi Wang
Man Ying Chiu
Sophie Plouviez
Didier Jollivet
Jian‐wen Qiu
01/01/2023
Article
Existing evidence on the impact of changes in marine ecosystem structure and functioning on ecosystem service delivery: A systematic map Authors' contacts
Environmental Evidence , 2023 , 12 (1) , pp. 13
Carole Sylvie Campagne
Laurie-Anne Roy
Joseph Langridge
Joachim Claudet
Rémi Mongruel
Damien Beillouin
Éric Thiébaut
01/01/2023
Article
A brief history of speciation research at the Station Biologique de Roscoff (1872-2022)
Cahiers de Biologie Marine , 2023 , 64 , pp. 9-19
T. Broquet
Christophe Destombe
Myriam Valero
D. Jollivet
01/01/2023
Article
The Bay of Bengal exposes abundant photosynthetic picoplankton and newfound diversity along salinity‐driven gradients
Environmental Microbiology , 2023
Jan Strauss
Chang Jae Choi
Jonathan Grone
Fabian Wittmers
Valeria Jimenez
Kriste Makareviciute-Fichtner
Charles Bachy
Gualtiero Spiro Jaeger
Camille Poirier
Charlotte Eckmann
et al.
01/01/2023
Article
Amoebophrya ceratii
Trends in Parasitology , 2023 , 39 (2) , pp. 152-153
Laure Guillou
Jeremy Szymczak
Catharina Alves-De-Souza
01/01/2023
Article
Beyond the limits of the unassigned protist microbiome: inferring large-scale spatio-temporal patterns of Syndiniales marine parasites
ISME Communications , 2023 , 3 (1) , pp. 16
Iris Rizos
Pavla Debeljak
Thomas Finet
Dylan Klein
Sakina-Dorothée Ayata
Fabrice Not
Lucie Bittner
01/01/2023
Article
Seasonal dynamics of a glycan‐degrading flavobacterial genus in a tidally mixed coastal temperate habitat
Environmental Microbiology , 2023
Maéva Brunet
Nolwen Le Duff
Fabienne Rigaut-Jalabert
Sarah Romac
Tristan Barbeyron
François Thomas
01/01/2023
Article
Investigating the risk of non-indigenous species introduction through ship hulls in Chile
Management of Biological Invasions , 2023 , 14 (1) , pp. 156-177
Javier Pinochet
Antonio Brante
Claire Daguin-Thiébaut
Florence Tellier
Frédérique Viard
01/01/2023
Article
Ocean acidification enhances primary productivity and nocturnal carbonate dissolution in intertidal rock pools
Biogeosciences , 2023 , 20 (20) , pp. 4289-4306
Narimane Dorey
Sophie Martin
Lester Kwiatkowski
01/01/2023
Article
Nested PCR Approach for petB Gene Metabarcoding of Marine Synechococcus Populations
Microbiology Spectrum , 2023 , 11 (2) , pp. 04086-22
Denise Rui Ying Ong
Andrés Gutiérrez-Rodríguez
Laurence Garczarek
Dominique Marie
Adriana Lopes dos Santos
01/01/2023
Article
A brief and personal history of plankton research in Roscoff
Cahiers de Biologie Marine , 2023 , 64 , pp. 53-63
Daniel Vaulot
12/31/2022
Article
Engaging at the science-policy interface as an early-career researcher: experiences and perceptions in biodiversity and ecosystem services research
Ecosystems and People , 2022 , 18 (1) , pp. 397-409
Anna Filyushkina
Hyeonju Ryu
Andrew Kadykalo
Ranjini Murali
C. Sylvie Campagne
Carla-Leanne Washbourne
Sophie Peter
Nada Saidi
Thuan Sarzynski
Paola Fontanella Pisa
et al.
12/20/2022
Article
Global Phylogeography of Marine Synechococcus in Coastal Areas Reveals Strong Community Shifts
mSystems , 2022 , 7 (6)
Hugo Doré
Jade Leconte
Ulysse Guyet
Solène Breton
Gregory Farrant
David Demory
Morgane Ratin
Mark Hoebeke
Erwan Corre
Frances Pitt
et al.
12/20/2022
Article
Global phylogeography of marine $Synechococcus$ in coastal areas reveals strong community shifts
mSystems , 2022 , 7 (6) , pp. ANR- 17-CE02-0014-01
Hugo Doré
Jade Leconte
Ulysse Guyet
Solène Breton
Gregory K Farrant
David Demory
Morgane Ratin
Mark Hoebeke
Erwan Corre
Frances D Pitt
et al.
12/14/2022
Preprint, Working Paper
Long-term population decline of a genetically homogenous continental-wide top Arctic predator
Marianne Gousy-Leblanc
Jean-François Therrien
Thomas Broquet
Delphine Rioux
Nadine Curt-Grand-Gaudin
Nathalie Tissot
Sophie Tissot
Ildiko Szabo
Laurie Wilson
Jack Evans
et al.
12/05/2022
Article
A robust approach to estimate relative phytoplankton cell abundances from metagenomes
Molecular Ecology Resources , 2022 , 23 (1) , pp. 16-40
Juan José Pierella Karlusich
Eric Pelletier
Lucie Zinger
Fabien Lombard
Adriana Zingone
Sébastien Colin
Josep M Gasol
Richard Dorrell
Nicolas Henry
Eleonora Scalco
et al.
12/01/2022
Article
Comparative biology and ecology of apicomplexans and dinoflagellates: a unique meeting of minds and biology
Trends in Parasitology , 2022 , 38 (12) , pp. 1012-1019
Ross F Waller
Catharina Alves-De-Souza
Phillip Cleves
Jan Janouškovec
Ehsan Kayal
Thomas Krueger
Jeremy Szymczak
Norico Yamada
Laure Guillou
12/01/2022
Article
Comparative analysis of the Mercenaria mercenaria genome provides insights into the diversity of transposable elements and immune molecules in bivalve mollusks
BMC Genomics , 2022 , 23 (1) , pp. 192
Sarah Farhat
Eric Bonnivard
Emmanuelle Pales Espinosa
Arnaud Tanguy
Isabelle Boutet
Nadège Guiglielmoni
Jean-François Flot
Bassem Allam
12/01/2022
Article
Marine gregarine genomes reveal the breadth of apicomplexan diversity with a partially conserved glideosome machinery
BMC Genomics , 2022 , 23 (1) , pp. 485
Julie Boisard
Evelyne Duvernois-Berthet
Linda Duval
Joseph Schrével
Laure Guillou
Amandine Labat
Sophie Le Panse
Gérard Prensier
Loïc Ponger
Isabelle Florent
11/16/2022
Preprint, Working Paper
Global observation of plankton communities from space
Hiroto Kaneko
Hisashi Endo
Nicolas Henry
Cédric Berney
Frédéric Mahé
Julie Poulain
Karine Labadie
Odette Beluche
Roy El Hourany
Samuel Chaffron
et al.
11/01/2022
Article
Chromosomal assembly of the flat oyster ( Ostrea edulis L.) genome as a new genetic resource for aquaculture
Evolutionary Applications , 2022 , 15 (11) , pp. 1730-1748
Isabelle Boutet
Homère Alves Monteiro
Lyam Baudry
Takeshi Takeuchi
Eric Bonnivard
Bernard Billoud
Sarah Farhat
Ricardo Gonzales-Araya
Benoit Salaun
Ann Andersen
et al.
11/01/2022
Article
Responses of early life stages of European abalone (Haliotis tuberculata) to ocean acidification after parental conditioning: Insights from a transgenerational experiment
Marine Environmental Research , 2022 , 181 , pp. 105753
Stéphanie Auzoux-Bordenave
Apolline Ledoux
Sophie Martin
Carole Di Poi
Marc Suquet
Aïcha Badou
Fanny Gaillard
Arianna Servili
Nelly Le Goïc
Sylvain Huchette
et al.
11/01/2022
Article
Two parallel chromosome‐level reference genomes to support restoration and aquaculture of European flat oyster Ostrea edulis
Evolutionary Applications , 2022 , 15 (11) , pp. 1709-1712
Tim Bean
Arnaud Tanguy
Carolina Peñaloza
Manu Kumar Gundappa
Isabelle Boutet
Ross Houston
Daniel Macqueen
Pierre Boudry
11/01/2022
Article
Chromosome‐level reference genome for European flat oyster ( Ostrea edulis L.)
Evolutionary Applications , 2022 , 15 (11) , pp. 1713-1729
Manu Kumar Gundappa
Carolina Peñaloza
Tim Regan
Isabelle Boutet
Arnaud Tanguy
Ross Houston
Tim Bean
Daniel Macqueen
10/28/2022
Preprint, Working Paper
Global phylogeography of marine Synechococcus in coastal areas reveals strikingly different communities than in the open ocean
Hugo Doré
Jade Leconte
Ulysse Guyet
Solène Breton
Gregory Farrant
David Demory
Morgane Ratin
Mark Hoebeke
Erwan Corre
Frances Pitt
et al.
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