Archives Hal
01/12/2022
Article
Strong population genomic structure of the toxic dinoflagellate Alexandrium minutum inferred from meta‐transcriptome samples
Environmental Microbiology , 2022 , 24 (12) , pp. 5966-5983
Mickael Le Gac
Lou Mary
Gabriel Metegnier
Julien Quéré
Raffaele Siano
Francisco Rodríguez
Christophe Destombe
Marc Sourisseau
01/12/2022
Rapport
Fiches descriptives des habitats marins benthiques de la Manche, de la Mer du Nord et de l’Atlantique
, 2022 , pp. 578
Marie La Rivière
Juliette delavenne
A.-L. Janson
Salomé Andres
Thibaut de Bettignies
Hugues Blanchet
François-Xavier Decaris
René Derrien
Sandrine Derrien-Courtel
Jacques Grall
et al.
01/12/2022
Article
Comparative biology and ecology of apicomplexans and dinoflagellates: a unique meeting of minds and biology
Trends in Parasitology , 2022 , 38 (12) , pp. 1012-1019
Ross F Waller
Catharina Alves-De-Souza
Phillip Cleves
Jan Janouškovec
Ehsan Kayal
Thomas Krueger
Jeremy Szymczak
Norico Yamada
Laure Guillou
01/12/2022
Article
Comparative analysis of the Mercenaria mercenaria genome provides insights into the diversity of transposable elements and immune molecules in bivalve mollusks
BMC Genomics , 2022 , 23 (1) , pp. 192
Sarah Farhat
Eric Bonnivard
Emmanuelle Pales Espinosa
Arnaud Tanguy
Isabelle Boutet
Nadège Guiglielmoni
Jean-François Flot
Bassem Allam
23/11/2022
Preprint, Working Paper
Nigratine as first-in-class dual inhibitor of necroptosis and ferroptosis regulated cell death
Claire Delehouzé
Arnaud Comte
Marcelle Hauteville
Peter G Goekjian
Marie-Thérèse Dimanche-Boitrel
Morgane Rousselot
Stéphane Bach
16/11/2022
Preprint, Working Paper
Global observation of plankton communities from space
Hiroto Kaneko
Hisashi Endo
Nicolas Henry
Cédric Berney
Frédéric Mahé
Julie Poulain
Karine Labadie
Odette Beluche
Roy El Hourany
Samuel Chaffron
et al.
01/11/2022
Article
Two parallel chromosome‐level reference genomes to support restoration and aquaculture of European flat oyster Ostrea edulis
Evolutionary Applications , 2022 , 15 (11) , pp. 1709-1712
Tim Bean
Arnaud Tanguy
Carolina Peñaloza
Manu Kumar Gundappa
Isabelle Boutet
Ross Houston
Daniel Macqueen
Pierre Boudry
01/11/2022
Article
Responses of early life stages of European abalone (Haliotis tuberculata) to ocean acidification after parental conditioning: Insights from a transgenerational experiment
Marine Environmental Research , 2022 , 181 , pp. 105753
Stéphanie Auzoux-Bordenave
Apolline Ledoux
Sophie Martin
Carole Di Poi
Marc Suquet
Aïcha Badou
Fanny Gaillard
Arianna Servili
Nelly Le Goïc
Sylvain Huchette
et al.
01/11/2022
Article
Chromosomal assembly of the flat oyster ( Ostrea edulis L.) genome as a new genetic resource for aquaculture
Evolutionary Applications , 2022 , 15 (11) , pp. 1730-1748
Isabelle Boutet
Homère Alves Monteiro
Lyam Baudry
Takeshi Takeuchi
Eric Bonnivard
Bernard Billoud
Sarah Farhat
Ricardo Gonzales-Araya
Benoit Salaun
Ann Andersen
et al.
01/11/2022
Article
Time-series incubations in a coastal environment illuminates the importance of early colonizers and the complexity of bacterial biofilm dynamics on marine plastics
Procedia Materials Science (Elsevier) , 2022 , 312 , pp. 119994
C. Lemonnier
M. Chalopin
A. Huvet
F. Le Roux
Y. Labreuche
B. Petton
L. Maignien
I. Paul-Pont
Julie Reveillaud
01/11/2022
Article
Chromosome‐level reference genome for European flat oyster ( Ostrea edulis L.)
Evolutionary Applications , 2022 , 15 (11) , pp. 1713-1729
Manu Kumar Gundappa
Carolina Peñaloza
Tim Regan
Isabelle Boutet
Arnaud Tanguy
Ross Houston
Tim Bean
Daniel Macqueen
01/11/2022
Comm. dans un congrès
Reactivity Under Microwave Irradiation of 2-amino 4H-chromene-3-carbonitrile as tool for the construction of potential bioactive derivatives
Ali Bouattour
Mehdi Fakhfakh
Houcine Ammar
Ludovic Paquin
Jean-Pierre Bazureau
Rémy Le Guével
Anne Corlu
Souhir Abid
Sandrine Ruchaud
Stéphane Bach
28/10/2022
Preprint, Working Paper
Global phylogeography of marine Synechococcus in coastal areas reveals strikingly different communities than in the open ocean
Hugo Doré
Jade Leconte
Ulysse Guyet
Solène Breton
Gregory Farrant
David Demory
Morgane Ratin
Mark Hoebeke
Erwan Corre
Frances Pitt
et al.
21/10/2022
Preprint, Working Paper
Acquisition of cell identity in the brown alga Ectocarpus : which of time, cell shape or position matters most?
Bernard Billoud
Denis Saint-Marcoux
Sabine Chenivesse
Carole Duchêne
Camille Noûs
Jane Langdale
Bénédicte Charrier
20/10/2022
Article
The Green Edge cruise: Understanding the onset, life and fate of the Arctic phytoplankton spring bloom
Earth System Science Data , 2022 , 14 , pp. 4607–4642
Flavienne Bruyant
Rémi Amiraux
Marie-Pier Amyot
Philippe Archambault
Lise Artigue
Lucas Bardedo de Freitas
Guislain Bécu
Simon Bélanger
Pascaline Bourgain
Annick Bricaud
et al.
18/10/2022
Poster
Eimeria tenella ROP kinase 2 induces p38 MAPK cellular pathway
Adeline Ribeiro E Silva
Mamadou Diallo
Alix Sausset
Thomas Robert
Stéphane Bach
Françoise I. Bussière
Fabrice Laurent
Sonia Lacroix-Lamandé
Anne Silvestre
18/10/2022
Article
Evolution and Diversity of the TopoVI and TopoVI-like Subunits With Extensive Divergence of the TOPOVIBL subunit
Molecular Biology and Evolution , 2022
Julia Brinkmeier
Susana M. Coelho
Henri-Marc Bourbon
Bernard de Massy
14/10/2022
Article
Stomach content and stable isotope analyses provide complementary insights into the trophic ecology of coastal temperate bentho-demersal assemblages under environmental and anthropogenic pressures
Marine Environmental Research , 2022 , 182 , pp. 105770
Sturbois Anthony
A Cozic
Gauthier Schaal
Nicolas Desroy
Pascal Riera
Olivier Le Pape
P Le Mao
A Ponsero
Alexandre Carpentier
13/10/2022
Comm. dans un congrès
Atelier - Migrations humaines et impacts sur l'environnement non-humain
P. Verdu
M. Mashkour
Myriam Valero
10/10/2022
Article
Siliceous Rhizaria abundances and diversity in the Mediterranean Sea assessed by combined imaging and metabarcoding approaches
Frontiers in Marine Science , 2022 , 9
Natalia Llopis Monferrer
Tristan Biard
Miguel Sandin
Fabien Lombard
Marc Picheral
Amanda Elineau
Lionel Guidi
Aude Leynaert
Paul Tréguer
Fabrice Not
05/10/2022
Article
Contrasted phylogeographic patterns of hydrothermal vent gastropods along South West Pacific: Woodlark Basin, a possible contact zone and/or stepping-stone
PLoS ONE , 2022 , 17 (10) , pp. e0275638
Camille Poitrimol
Éric Thiébaut
Claire Daguin-Thiébaut
Anne-Sophie Le Port
Marion Ballenghien
Adrien Tran Lu Y
Didier Jollivet
Stephane Hourdez
Marjolaine Matabos
01/10/2022
Article
The effect of cytoskeleton inhibitors on coccolith morphology in Coccolithus braarudii and Scyphosphaera apsteinii
Limnology and Oceanography , 2022 , 67 (10) , pp. 2309-2324
Gerald Langer
Ian Probert
Alison Taylor
01/10/2022
Article
Design and in vitro characterization of RXR variants as tools to investigate the biological role of endogenous rexinoids
Journal of Molecular Endocrinology , 2022 , 69 (3) , pp. 377-390
Albane Le Maire
Martial Rey
Valérie Vivat
Laura Guée
Pauline Blanc
Christian Malosse
Julia Chamot-Rooke
Pierre Germain
William Bourguet
01/10/2022
Article
A novel nuclear receptor subfamily enlightens the origin of heterodimerization
BMC Biology , 2022 , 20 (1) , pp. 217
Brice Beinsteiner
Gabriel V Markov
Maxime Bourguet
Alastair G Mcewen
Stéphane Erb
Abdul Kareem Mohideen Patel
Fatima Z El Khaloufi El Khaddar
Claire Lecroisey
Guillaume Holzer
Karim Essabri
et al.
30/09/2022
Article
Next generation sequencing of Tunisian Leigh syndrome patients reveals novel variations: impact for diagnosis and treatment
Bioscience Reports , 2022 , 42 (9)
Meriem Hechmi
Majida Charif
Ichraf Kraoua
Meriem Fassatoui
Hamza Dallali
Valerie Desquiret-Dumas
Céline Bris
David Goudenège
Cyrine Drissi
Saïd Galaï
et al.
26/09/2022
Article
Diazotrophs are overlooked contributors to carbon and nitrogen export to the deep ocean
The International Society of Microbiologial Ecology Journal , 2022
Sophie Bonnet
Mar Benavides
Frédéric a C Le Moigne
Mercedes Camps
Antoine Torremocha
Olivier Grosso
Céline Dimier
Dina Spungin
Ilana Berman-Frank
Laurence Garczarek
et al.
20/09/2022
Article
Structure Activity Relationship Studies around DB18, a Potent and Selective Inhibitor of CLK Kinases
Molecules , 2022 , 27
Dabbugoddu Brahmaiah
Anagani Kanaka Durga Bhavani
Pasula Aparna
Nangunoori Sampath Kumar
Hélène Solhi
Rémy Le Guevel
Blandine Baratte
Thomas Robert
Sandrine Ruchaud
Stéphane Bach
et al.
15/09/2022
Preprint, Working Paper
AuCoMe: inferring and comparing metabolisms across heterogeneous sets of annotated genomes
Arnaud Belcour
Jeanne Got
Méziane Aite
Ludovic Delage
Jonas Collen
Clémence Frioux
Catherine Leblanc
Simon Dittami
Samuel Blanquart
Gabriel Markov
et al.
14/09/2022
Article
An update on dissolved methane distribution in the subtropical North Atlantic Ocean
Ocean Science , 2022 , 18 (5) , pp. 1377-1388
Anna Kolomijeca
Lukas Marx
Sarah Reynolds
Thierry Cariou
Edward Mawji
Cédric Boulart
13/09/2022
Article
Impact of in Situ Simulated Climate Change on Communities and Non-Indigenous Species: Two Climates, Two Responses
Journal of Chemical Ecology , 2022 , 48 (9-10) , pp. 761-771
Robin Gauff
Christophe D Lejeusne
Stephane Greff
Stephane Loisel
Olivier Bohner
Dominique Davoult
05/09/2022
Poster
Developments and opportunities with Workflow4Metabolomics
Lain Pavot
Mélanie Pétéra
Nils Paulhe
Yann Guitton
Gildas Le Corguillé
Julien Saint-Vanne
Marie Tremblay-Franco
Cécile Canlet
Jean-François Martin
Ralf Weber
et al.
02/09/2022
Article
The evolution of recombination in self-fertilizing organisms
Genetics , 2022
Roman Stetsenko
Denis Roze
01/09/2022
Article
Synthesis and Kinase Inhibitory Potencies of Pyrazolo[3,4-g]Isoquinolines
Molecules , 2022 , 27 (17) , pp. 5578
Mathilde Defois
Chloé Rémondin
Béatrice Josselin
Lionel Nauton
Vincent Théry
Fabrice Anizon
Sandrine Ruchaud
Francis Giraud
Pascale Moreau
17/08/2022
Article
Plankton Planet: A frugal, cooperative measure of aquatic life at the planetary scale
Frontiers in Marine Science , 2022 , 9 , pp. 936972
Colomban de Vargas
Noan Le Bescot
Thibaut Pollina
Nicolas Henry
Sarah Romac
Sébastien Colin
Nils Haëntjens
Margaux Carmichael
Calixte Berger
David Le Guen
et al.
11/08/2022
Article
Biophysical modelling of larval dispersal and population connectivity of a stalked barnacle: implications for fishery governance
Marine Ecology Progress Series , 2022 , 694 , pp. 105-123
R Nolasco
J Dubert
Jl Acuña
A Aguión
T Cruz
Jn Fernandes
Kj Geiger
D Jacinto
G Macho
D Mateus
et al.
09/08/2022
Article
Diversity and biogeography of planktonic diatoms in Svalbard fjords: The role of dispersal and Arctic endemism in phytoplankton community structuring
Elementa: Science of the Anthropocene , 2022 , 10 (1)
Luka Šupraha
Kerstin Klemm
Sandra Gran-Stadniczeñko
Cora Hörstmann
Daniel Vaulot
Bente Edvardsen
Uwe John
04/08/2022
Article
Structural and functional characterization of orcokinin B-like neuropeptides in the cuttlefish ($Sepia\ officinalis$)
Marine drugs , 2022 , 20 (8) , pp. 505
Maxime Endress
Céline Zatylny-Gaudin
Jérôme Leprince
Benjamin Lefranc
Erwan Corre
Gildas Le Corguillé
Benoit Bernay
Alexandre Leduc
Jimmy Rangama
Liza Mouret
et al.
01/08/2022
Article
Planktonic protist diversity across contrasting Subtropical and Subantarctic waters of the southwest Pacific
Progress in Oceanography , 2022 , 206 (7) , pp. 102809
Miguel Sandin
Sarah Romac
Fabrice Not
01/08/2022
Article
Modeling water regulation ecosystem services: A review in the context of ecosystem accounting
Ecosystem Services , 2022 , 56 , pp. 101458
Stoyan Nedkov
Sylvie Campagne
Bilyana Borisova
Petr Krpec
Hristina Prodanova
Ioannis Kokkoris
Desislava Hristova
Solen Le Clec'H
Fernando Santos-Martin
Benjamin Burkhard
et al.
01/08/2022
Article
Recommendations for connecting molecular sequence and biodiversity research infrastructures through ELIXIR
F1000Research , 2022 , 10
Robert M Waterhouse
Anne-Françoise Adam-Blondon
Donat Agosti
Petr Baldrian
Bachir Balech
Erwan Corre
Robert P Davey
Henrik Lantz
Graziano Pesole
Christian Quast
et al.
22/07/2022
Article
Variation in Thermal Tolerance of the Giant Kelp’s Gametophytes: Suitability of Habitat, Population Quality or Local Adaptation?
Frontiers in Marine Science , 2022 , 9
Ronan Becheler
Daniela Haverbeck
Corentin Clerc
Gabriel Montecinos
Myriam Valero
Andrés Mansilla
Sylvain Faugeron
22/07/2022
Article
PlanktoScope: Affordable Modular Quantitative Imaging Platform for Citizen Oceanography
Frontiers in Marine Science , 2022 , 9
Thibaut Pollina
Adam Larson
Fabien Lombard
Hongquan Li
David Le Guen
Sébastien Colin
Colomban de Vargas
Manu Prakash
08/07/2022
Article
Intracellular development and impact of a marine eukaryotic parasite on its zombified microalgal host
The International Society of Microbiologial Ecology Journal , 2022 , 16 (10) , pp. 2348-2359
Johan Decelle
Ehsan Kayal
Estelle Bigeard
Benoit Gallet
Jeremy Bougoure
Peta Clode
Nicole Schieber
Rachel Templin
Elisabeth Hehenberger
Gerard Prensier
et al.
05/07/2022
Poster
MyGOD : Visualization and analysis interface for marine genomic observatories data
Charlotte André
Mark Hoebeke
Nicolas Henry
Cyril Noel
Patrick Durand
Erwan Corre
05/07/2022
Poster
ABRomics - a digital platform on antimicrobial resistance to store, integrate, analyze and share multi-omics data
Pierre Marin
Julie Lao
Kenzo-Hugo Hillion
Aurélien Birer
Nadia Goué
Richard Bonnet
Fabien Mareuil
Gildas Le Gorguille
Etienne Ruppe
Consortium Abromics
et al.
04/07/2022
Poster
Eimeria tenella induces p38 MAPK signalling pathway
Adeline Ribeiro E Silva
Mamadou Diallo
Alix Sausset
Thomas Robert
Stéphane Bach
Françoise I. Bussière
Fabrice Laurent
Sonia Lacroix-Lamandé
Anne Silvestre
01/07/2022
Article
Origin, diversity, and biogeography of Antarctic scale worms (Polychaeta: Polynoidae): a wide‐scale barcoding approach
Ecology and Evolution , 2022 , 12 (7)
Dominique A Cowart
Stefano Schiaparelli
Maria Chiara Alvaro
Matteo Cecchetto
Anne‐sophie Le Port
Didier Jollivet
Stephane Hourdez
01/07/2022
Article
Next generation sequencing identifies novel PMPCA variants in patients with dominant optic atrophy
Genes , 2022 , 13 (7) , pp. 1202
Majida Charif
Arnaud Chevrollier
Naïg Gueguen
Selma Kane
Céline Bris
David Goudenège
Valerie Desquiret-Dumas
Isabelle Meunier
Fanny Mochel
Luc Jeanjean
et al.
01/07/2022
Article
Phytoplanktonic response to simulated volcanic and desert dust deposition events in the South Indian and Southern Oceans
Limnology and Oceanography , 2022 , 67 (7) , pp. 1537-1553
Carla Geisen
Céline Ridame
Emilie Journet
Pierre Delmelle
Dominique Marie
Claire Lo Monaco
Nicolas Metzl
Rawaa Ammar
Joelle Kombo
Damien Cardinal
01/07/2022
Article
Intra‐genomic rRNA gene variability of Nassellaria and Spumellaria (Rhizaria, Radiolaria) assessed by Sanger, MinION and Illumina sequencing
Environmental Microbiology , 2022 , 24 (7) , pp. 2979-2993
Miguel Sandin
Sarah Romac
Fabrice Not
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