Created 24/10/2016 Updated 10/02/2017
24 Oct
2016
Research news
Genome sequencing of Zobellia galactanivorans, a model marine bacterium for the study of algae-bacteria interactions and for blue biotechnology

In collaboration with Genoscope and the Max Planck Institute of Bremen, the Marine Glycobiology group (CNRS/UPMC) has published in Environmental Microbiology an extensive genomic and physiological analysis of Z. galactanivorans.

Algae constitute a huge biomass composed at least by 50% of polysaccharides. These complex polymers essentially differ from the polysaccharides of land plants and the enzymes involved in their degradation remain largely uncharacterized. In the last 20 years the marine bacterium Zobellia galactanivorans has emerged as the main model for the discovery of enzymes specific for the bioconversion of algal polysaccharides.The characterization of these new enzymes is a key issue to understand the marine carbon cycle. These enzymes are also essential for the valorization of algal biomass and for blue biotechnology.

In collaboration with Genoscope and the Max Planck Institute of Bremen, the Marine Glycobiology group (CNRS/UPMC) has published in Environmental Microbiology an extensive genomic and physiological analysis of Z. galactanivorans. Notably a comparison with more than 100 genomes of marine heterotrophic bacteria confirms that Z. galactanivorans is currently the microorganism with the largest capacities for the bioconversion of algal polysaccharides. This microbe also possesses numerous adaptive traits for algae-associated life (consumption of algal exudates, iodine metabolism, methylotrophy, etc). Therefore, Z. galactanivorans is also a suitable model for the study of algae-bacteria interactions. Finally on a more holistic level this comparative genomic study demonstrates that habitat and taxon are two major forces driving the carbohydrate catabolism of marine bacteria.

 

Reference:

Barbeyron T, Thomas F, Barbe V, Teeling H, Schenowitz C, Dossat C, Goesmann A, Leblanc C, Glöckner FO, Czjzek M, Amann R and Michel G. (2016) Habitat and taxon as driving forces of carbohydrate catabolism in marine heterotrophic bacteria: example of the model algae-associated bacterium Zobellia galactanivorans. Environmental Microbiology, doi: 10.1111/1462-2920.1358