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Since 28 jan 2005
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Papers
Papers published since 2005 (older papers are available through the Publication list)

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Mazard, S., Ostrowski, M., Partensky, F. Scanlan, D. J. 2012. Multilocus sequence analysis, taxonomic resolution and biogeography of marine Synechococcus. Environmental Microbiology in press: doi: 10.1111/j.1462-2920.2011.02514.x - pdf (http://www.sb-roscoff.fr/Phyto/index.php?option=com_docman task=doc_download gid=672)
Siano, R., Montresor, M., Probert, I., Not, F. de Vargas, C. 2010. Pelagodinium gen. nov. and P. beii comb. nov., a dinoflagellate symbiont of planktonic foraminifera. Protist 161:385-399.
Ishitani, Y., Ujiié, Y., de Vargas, C., Not, F. Takahashi, K. 2012. Two distinct lineages in the radiolarian Order Spumellaria having different ecological preferences. Deep Sea Research Part II: Topical Studies in Oceanography in press
Logares, R., Audic, S., Santini, S., Pernice, M. C., de Vargas, C. Massana, R. 2012. Diversity patterns and activity of uncultured marine heterotrophic flagellates unveiled with pyrosequencing. ISME Journal in press
Masquelier, S., Foulon, E., Jouenne, F., Ferréol, M., Brussaard, C. P. D. Vaulot, D. 2011. Distribution of eukaryotic plankton in the English Channel and the North Sea in summer. J. Sea Res. 66:111-122
Feingersch, R., Suzuki, M. T., Shmoish, M., Sharon, I., Sabehi, G., Partensky, F. Beja, O. 2010. Microbial community genomics in eastern Mediterranean Sea surface waters. ISME Journal 4:78-87.
Decelle, J., Siano, R., Probert, I., Poirier, C. Not, F. 2012. Multiple microalgal partners in symbiosis with the Acantharia Acanthochiasma sp. (Radiolaria). Symbiosis in press:doi: 10.1007/s13199-012-0195-x
Karlov, D. S., Marie, D., Chuvochina, M. S., Alekhina, I. A. Bulat, S. A. 2011. Microbial communities of water column of lake Radok, East Antartica, dominated by abundant Actinobacterium Candidatus Planktophila limnetica . Microbiology 80:576 - 579.
Collado-Fabri, S., Ulloa, O. Vaulot, D. 2011. Structure and seasonal dynamics of the eukaryotic picophytoplankton community in a wind-driven coastal upwelling ecosystem. Limnology and Oceanography 56:2334-2346
Bachar, D., Guillou, L. Christen, R. 2012. Detection of introns in eukaryotic small subunit ribosomal RNA gene sequences. Dataset Papers in Bioinformatics doi:
Boeuf, D., Cottrell, M. T., Kirchman, D. L., Lebaron, P. Jeanthon, C. 2013. Summer community structure of aerobic anoxygenic phototrophic bacteria in the western Arctic Ocean. FEMS Microbiology Ecology in press
Thompson, A. W., Foster, R. A., Krupke, A., Carter, B. J., Musat, N., Vaulot, D., Kuypers, M. M. M. Zehr, J. P. 2012. Unicellular cyanobacterium symbiotic with a single-celled eukaryotic alga. Science 337:1546-1550. doi: 10.1126/science.1222700 Supplementary material
Cermeño, P., de Vargas, C., Abrantes, F. Falkowski, P. G. 2010. Phytoplankton Biogeography and Community Stability in the Ocean. PLoS ONE 5:e10037.
Hagino, K., Bendif, E. M., Young, J., Kogame, K., Takano, Y., Probert, I., Horiguchi, T., de Vargas, C. Okada, H. 2011. New evidence for morphological and genetic variation in the cosmopolitan coccolithophore Emiliana huxleyi (prymnesiophyceae) from the cox1b-ATP4 genes. Journal of Phycology 47:1164-1176
Sauvadet, A.-L., Gobet, A. Guillou, L. 2010. Comparative analysis between protist communities from the deep-sea pelagic ecosystem and specific deep hydrothermal habitats. Environmental Microbiology in press - Supplementary material
Bougon, N., Aquilina, L., Molénat, J., Marie, D., Delettre, Y., Chancerel, E. Vandenkoornhuyse, P. 2012. Influence of depth and time on diversity of free-living microbial community in the variably saturated zone of a granitic aquifer. FEMS Microbiology Ecology 80:98-113.
Rousseau, V., Lantoine, F., Rodriguez, F., Le Gall, F., Chrétiennot-Dinet, M.-J. Lancelot, C. 2013. Characterization of Phaeocystis globosa (Haptophyceae), the blooming species in the Southern North Sea. Journal of Sea Research 76:105-113.
Zinger, L., Gobet, A. Pommier, T. 2012. Two decades of describing the unseen majority of aquatic microbial diversity. Molecular Ecology 21:1878-1896.
Siano, R., Alves-de-Souza, C., Foulon, E., Bendif, E. M., Simon, N., Guillou, L. Not, F. 2011. Distribution and host diversity of Amoebophryidae parasites across oligotrophic waters of the Mediterranean Sea. Biogeoscience 8:267-278.
Pawlowski, J., Christen, R., Lecroq, B., Bachar, D., Shahbazkia, H. R., Amaral-Zettler, L. Guillou, L. 2011. Eukaryotic richness in the abyss: Insights from pyrotag sequencing. PLoS ONE 6:e18169.
Guilloux, L., Rigaut-Jalabert, F., Jouenne, F., Ristori, S., Viprey, M., Not, F., Vaulot, D. Simon, N. 2013. An annotated checklist of Marine Phytoplankton taxa at the SOMLIT-Astan time series off Roscoff (Western Channel, France): data collected from 2000 to 2010. Cahiers de Biologie Marine 54:247-256.
Roux, S., Enault, F., Bronner, G., Vaulot, D., Forterre, P. Krupovic, M. 2013. Chimeric viruses blur the borders between the major groups of eukaryotic single-stranded DNA viruses. Nature Communications: 4
Ota, S., Kudo, A. Ishida, K. 2011. Gymnochlora dimorpha sp. nov., a chlorarachniophyte with unique daughter cell behaviour. Phycologia 50:317-326.
Jacquet, S., Prieur, L., Nival, P. Vaulot, D. 2010. Structure and variability of the microbial community associated to the Alboran Sea frontal system (Western Mediterranean) in winter. Journal of Oceanography, Research and Data 3:47-75.
Shukla, A., Biswas, A., Blot, N., Partensky, F., Karty, J., Hammad, L., Garczarek, L., Gutu, A., Schluchter, W. Kehoe, D. 2013. Phycoerythrin-specific bilin lyase–isomerase controls blue-green chromatic acclimation in marine Synechococcus. Proceedings of the National Academy of Sciences of the United States of America 109:20136–20141. doi:10.1073/pnas.1211777109
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