Roscoff Culture Collection

August 2011

   - Novel strains

RCC	Class	Genus	Species	Strain	Ocean origin
2545	Dinophyceae	Gymnodinium?		Dino bloom Aquarium	English Channel
2546	Coscinodiscophyceae	Chaetoceros	neogracile	CCMP1317	North Pacific Ocean
2547	Coscinodiscophyceae	Chaetoceros	neogracile	CCMP189	Antarctic Ocean
2548	Coscinodiscophyceae	Chaetoceros	neogracile	CCMP190	Antarctic Ocean
2549	Coscinodiscophyceae	Chaetoceros	neogracile	CCMP187	Antarctic Ocean
2550	Pavlovophyceae	Pavlova	sp.	M1-2	Pacific Ocean
2551	Pavlovophyceae	Pavlova	sp.	M1-18	Pacific Ocean
2552	Bacillariophyceae	Cylindrotheca	closterium	M5-14	Pacific Ocean
2553	Cyanophyceae	Synechococcus	sp.	RS9915 Clonal	Red Sea
2554	Cyanophyceae	Synechococcus	sp.	A15-60 Clonal	Atlantic Ocean
2555	Cyanophyceae	Synechococcus	sp.	WH8101 Clonal	Atlantic Ocean
2556	Cyanophyceae	Synechococcus	sp.	A15-28 Clonal	Atlantic Ocean
2557	Cyanophyceae	Synechococcus	sp.	A15-28 Clonal	Atlantic Ocean
2558	Bacillariophyceae	Odontella	sp.	RA110113-6A2	English Channel
2559	Bacillariophyceae	Helicotheca	sp.	RA110113-4F3	English Channel
2560	Bacillariophyceae	Thalasiosira	sp,	RA110113-4A2	English Channel
2561	Bacillariophyceae	Lauderia	annulata	RA110113-4D2	English Channel
2562	Bacillariophyceae	Unknown		RA110113-4C1	English Channel
2563	Dinophyceae	Prorocentrum	sp.	RA110113-6A3	English Channel

 

  - Addition of new papers that cross reference RCC strains

•  Peperzak, L. and Brussaard, C.P.D.    2011    Flow cytometric applicability of fluorescent vitality probes on phytoplankton    J. Phycol. 47: 692-702
• Rokitta, S.D., de Nooijer, L.J., Trimborn, S., de Vargas, C., Rost, B. and John, U.    2011    Transcriptome analyses reveal differential gene expression patterns between the life-cycle stages of Emiliania huxleyi (Haptophyta) and reflect specialization to different ecological niches    J. Phycol. 47: 829-838
• McDonald, S.M., Plant, J.N. and Worden, A.Z.    2010    The mixed lineage nature of nitrogen transport and assimilation in marine eukaryotic phytoplankton: a case Study of Micromonas    Mol. Biol. Evol. 27: 2268-2283
• Langer, G., de Nooijer, L.J. and Oetjen, K.    2010    On the role of the cytoskeleton in coccolith morphogenesis: the effect of cytoskeleton inhibitors    J. Phycol. 46: 1252-1256
• Jouenne, F., Eikrem, W., Le Gall, F., Johnsen, G. and Vaulot, D.    2011    Prasinoderma singularis sp. nov., a solitary coccoid prasinophyte from the South East Pacific Ocean    Protist 162: 70-84
• Reid, E.L., Worthy, C.A., Probert, I., Ali, S.T., Love, J., Napier, J., Littlechild, J.A., Somerfield, P.J. and Allen, M.J.    2011    Coccolithophores: Functional Biodiversity, Enzymes and Bioprospecting    Marine Drugs 9: 586-602
• Jeanthon, C., Boeuf, D., Dahan, O., Le Gall, F., Garczarek, L., Bendif, E.M. and Lehours, A.-C.    2011    Diversity of cultivated and metabolically active aerobic anoxygenic phototrophic bacteria along an oligotrophic gradient in the Mediterranean Sea    Biogeosciences 8: 1955-1970
• Edvardsen, B., Eikrem, W., Throndsen, J., A., S., Probert, I. and Medlin, L.    2011    Ribosomal DNA phylogenies and a morphological revision privide the basis for a new taxonomy of Prymnesiales (Haptophyta)    Eur. J. Phycol. 46: 202-228
• Giovagnetti, V., Cataldo, M.L., Conversano, F. and Brunet, C.    2010    Functional relation between growth, photosynthetic rate and regulation in the coastal picoeukaryote Phaeomonas sp. RCC 503 (Pinguiophyceae, Stramenopiles)    J. Plankton Res. 32: 1501-1511
• Guillou, L.    2011    Characterization of the Parmales: much more than the resolution of a taxonomic enigma    J. Phycol. 47: 2-4
• Ichinomiya, M., Yoshikawa, S., Kamiya, M., Ohki, K., Takaichi, S. and Kuwata, A.    2011    Isolation and characterization of Parmales (Heterokonta/Heterokontophyta/Stramenopiles) from the Oyashio region, Western North Pacific    J. Phycol. 47: 144-151
• Ishida, K.-i., Endo, H. and Koike, S.    2011    Partenskyella glossopodia (Chlorarachniophyceae) possesses a nucleomorph genome of approximately 1 Mbp    Phycol. Res. 59: 120-122
• Jancek, S., Gourbiere, S., Moreau, H. and Piganeau, G.    2008    Clues about the genetic basis of adaptation emerge from comparing the proteomes of two Ostreococcus ecotypes (Chlorophyta, Prasinophyceae)    Mol. Biol. Evol. 25: 2293-300
• Worden, A.Z. and Allen, A.E.    2010    The voyage of the microbial eukaryote    Curr. Opin. Microbiol. 13: 652-660

May 2011

• Addition of 369 new sequences of RCC strains (both published and unpublished)

• RCC 2537 to RCC 2544 (8 strains) : Eukaryotic strains deposited by the University of Oslo (S. Ota)
• RCC 2523 to RCC 2536 (14 strains) : Clonal version of Synechococcus strains (F. Humily)
• RCC 2487 to RCC 2522 (36 strains) : Arctic strains isolated during the MALINA cruise